Detailed information of g767.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032222449.2, trichohyalin-like [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E7F021Palmitoyltransferase ZDHHC12-B OS=Danio rerio OX=7955 GN=zdhhc12b PE=3 SV=1
Q96GR4Palmitoyltransferase ZDHHC12 OS=Homo sapiens OX=9606 GN=ZDHHC12 PE=1 SV=2
Q6DGF5Palmitoyltransferase ZDHHC12 OS=Rattus norvegicus OX=10116 GN=Zdhhc12 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02301HORMAHORMA domainDomainInterproscan
PF08158SDA1_HEATSDA1, HEAT repeatRepeatInterproscan
PF21638SDA1_CSDA1, C-terminalDomainInterproscan
PF05285SDA1_domSDA1, conserved domainDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF20865FAM186A-B_CFAM186A/B, C-terminalDomainInterproscan
PF05786Cnd2Condensin complex subunit 2FamilyInterproscan
PF01529DHHCDHHC palmitoyltransferaseFamilyInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003511DomainHORMA domainInterproscan
IPR036570Homologous_superfamilyHORMA domain superfamilyInterproscan
IPR045091FamilyMad2-likeInterproscan
IPR027312FamilySda1Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012977DomainSDA1, N-terminalInterproscan
IPR048292DomainSDA1, C-terminal domainInterproscan
IPR007949DomainSDA1, middle domainInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR034364DomainPABP, RNA recognition motif 1Interproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR006515FamilyPolyadenylate binding protein, human types 1, 2, 3, 4Interproscan
IPR045305DomainPABP, RNA recognition motif 2Interproscan
IPR049146DomainFAM186A/B, C-terminalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR022816FamilyCondensin complex subunit 2/barrenInterproscan
IPR001594DomainPalmitoyltransferase, DHHC domainInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR051882FamilyATF bZIP Transcription FactorsInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050648FamilyF-box/Leucine-rich repeatInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Interproscan
PTHR12730HSDA/SDA1-RELATEDInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR24012RNA BINDING PROTEINInterproscan
PTHR37915-Interproscan
PTHR13108CONDENSIN COMPLEX SUBUNIT 2Interproscan
PTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINInterproscan
PTHR46164ATF6, ISOFORM CInterproscan
PTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR BInterproscan
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016035Cellular Componentzeta DNA polymerase complexInterproscan
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0008266Molecular Functionpoly(U) RNA bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000796Cellular Componentcondensin complexInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0000799Cellular Componentcondensin complexInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0016409Molecular Functionpalmitoyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006612Biological Processprotein targeting to membraneInterproscan
GO:0018230Biological Processpeptidyl-L-cysteine S-palmitoylationInterproscan
GO:0019706Molecular Functionprotein-cysteine S-palmitoyltransferase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14856SDA1, SDAD1; protein SDA1-Spliceosomeko03041deepkoala
Ribosome biogenesisko03009deepkoala

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