Detailed information of g770.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3168094.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V8M0Protein KRI1 homolog OS=Bos taurus OX=9913 GN=KRI1 PE=2 SV=3
Q8N9T8Protein KRI1 homolog OS=Homo sapiens OX=9606 GN=KRI1 PE=1 SV=3
Q8VDQ9Protein KRI1 homolog OS=Mus musculus OX=10090 GN=Kri1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12998INGInhibitor of growth proteins N-terminal histone-bindingCoiled-coilInterproscan
PF03371PRP38PRP38 familyFamilyInterproscan
PF13361UvrD_CUvrD-like helicase C-terminal domainDomainInterproscan
PF00580UvrD-helicaseUvrD/REP helicase N-terminal domainDomainInterproscan
PF05178Kri1KRI1-like familyFamilyInterproscan
PF12936Kri1_CKRI1-like family C-terminalFamilyInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026983FamilyDynein heavy chainInterproscan
IPR024610DomainInhibitor of growth protein, N-terminal histone-bindingInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR028651FamilyING familyInterproscan
IPR005037FamilyPre-mRNA-splicing factor 38Interproscan
IPR014016DomainUvrD-like helicase, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014017DomainUvrD-like DNA helicase, C-terminalInterproscan
IPR000212FamilyDNA helicase, UvrD/REP typeInterproscan
IPR018034FamilyKRR1 interacting protein 1Interproscan
IPR024626DomainKri1-like, C-terminalInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR051219FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR023780DomainChromo domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR037690FamilyProtein FAM204AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR10333INHIBITOR OF GROWTH PROTEINInterproscan
PTHR23142UNCHARACTERIZEDInterproscan
PTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERInterproscan
PTHR14490ZINC FINGER, ZZ TYPEInterproscan
PTHR22812CHROMOBOX PROTEINInterproscan
PTHR22906PROPERDINInterproscan
PTHR14386PROTEIN FAM204AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0000725Biological Processrecombinational repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0033202Cellular ComponentDNA helicase complexInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0000447Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005721Cellular Componentpericentric heterochromatinInterproscan
GO:0006325Biological Processchromatin organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12850PRPF38B; pre-mRNA-splicing factor 38B-Ribosome biogenesisko03009deepkoala
Spliceosomeko03041deepkoala

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