Detailed information of g775.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002166188.2, transportin-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92973Transportin-1 OS=Homo sapiens OX=9606 GN=TNPO1 PE=1 SV=2
Q3SYU7Transportin-1 OS=Bos taurus OX=9913 GN=TNPO1 PE=1 SV=2
Q8BFY9Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF06702Fam20CGolgi casein kinase, C-terminal, Fam20FamilyInterproscan
PF16123HAGH_CHydroxyacylglutathione hydrolase C-terminusFamilyInterproscan
PF02776TPP_enzyme_NThiamine pyrophosphate enzyme, N-terminal TPP binding domainDomainInterproscan
PF03810IBN_NImportin-beta N-terminal domainRepeatInterproscan
PF13513HEAT_EZHEAT-like repeatRepeatInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF05038Cytochrom_B558aCytochrome Cytochrome b558 alpha-subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR009581DomainFAM20, C-terminalInterproscan
IPR024869FamilyFAM20Interproscan
IPR032282DomainHydroxyacylglutathione hydrolase, C-terminal domainInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR045229FamilyThiamine pyrophosphate enzymeInterproscan
IPR012001DomainThiamine pyrophosphate enzyme, N-terminal TPP-binding domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR001494DomainImportin-beta, N-terminal domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR040122FamilyImportin beta familyInterproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR007732FamilyCytochrome b558 alpha-subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12450DENTIN MATRIX PROTEIN 4 PROTEIN FAM20Interproscan
PTHR11935BETA LACTAMASE DOMAINInterproscan
PTHR18968THIAMINE PYROPHOSPHATE ENZYMESInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10527IMPORTIN BETAInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR15168CYTOCHROME B-245 LIGHT CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0016773Molecular Functionphosphotransferase activity, alcohol group as acceptorInterproscan
GO:0004416Molecular Functionhydroxyacylglutathione hydrolase activityInterproscan
GO:0003984Molecular Functionacetolactate synthase activityInterproscan
GO:0005948Cellular Componentacetolactate synthase complexInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0009099Biological ProcessL-valine biosynthetic processInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0030976Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0061608Molecular Functionnuclear import signal receptor activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08009CYBA, P22PHOX; cytochrome b-245, alpha polypeptide-Ribosome biogenesisko03009deepkoala
Membrane traffickingko04131deepkoala
Membrane traffickingko04131deepkoala

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