Gene detail

Detailed information of g776.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002159317.1, G-protein coupled receptor-associated protein LMBRD2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q68DH5	G-protein coupled receptor-associated protein LMBRD2 OS=Homo sapiens OX=9606 GN=LMBRD2 PE=1 SV=1
Q8C561	G-protein coupled receptor-associated protein LMBRD2 OS=Mus musculus OX=10090 GN=Lmbrd2 PE=1 SV=1
Q5F3F5	G-protein coupled receptor-associated protein LMBRD2 OS=Gallus gallus OX=9031 GN=LMBRD2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16679	CDT1_C	DNA replication factor Cdt1 C-terminal domain	Domain	Interproscan
PF08839	CDT1	DNA replication factor CDT1 like	Domain	Interproscan
PF00965	TIMP	Tissue inhibitor of metalloproteinase	Domain	Interproscan
PF01490	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF00019	TGF_beta	Transforming growth factor beta like domain	Domain	Interproscan
PF04791	LMBR1	LMBR1-like membrane protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR032054	Domain	DNA replication factor Cdt1, C-terminal	Interproscan
IPR014939	Domain	CDT1 Geminin-binding domain-like	Interproscan
IPR045173	Family	DNA replication factor Cdt1	Interproscan
IPR038090	Homologous_superfamily	DNA replication factor Cdt1, C-terminal WH domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR001820	Family	Protease inhibitor I35 (TIMP)	Interproscan
IPR027465	Homologous_superfamily	Proteinase inhibitor I35b (TIMP), C-terminal	Interproscan
IPR008993	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR013057	Domain	Amino acid transporter, transmembrane domain	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR051940	Family	Chitin-binding developmental regulator	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR001839	Domain	Transforming growth factor-beta, C-terminal	Interproscan
IPR029034	Homologous_superfamily	Cystine-knot cytokine	Interproscan
IPR017948	Conserved_site	Transforming growth factor beta, conserved site	Interproscan
IPR015615	Family	Transforming growth factor-beta-related	Interproscan
IPR051584	Family	GPCR-associated LMBR1 domain-containing protein	Interproscan
IPR006876	Family	LMBR1-like membrane protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR35558	SGNH_HYDRO DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR28637	DNA REPLICATION FACTOR CDT1	Interproscan
PTHR11844	METALLOPROTEASE INHIBITOR	Interproscan
PTHR22950	AMINO ACID TRANSPORTER	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23301	CHITIN BINDING PERITROPHIN-A	Interproscan
PTHR43184	MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11848	TGF-BETA FAMILY	Interproscan
PTHR21355	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000076	Biological Process	DNA replication checkpoint signaling	Interproscan
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0030174	Biological Process	regulation of DNA-templated DNA replication initiation	Interproscan
GO:0070182	Molecular Function	DNA polymerase binding	Interproscan
GO:0071163	Biological Process	DNA replication preinitiation complex assembly	Interproscan
GO:0008191	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0002020	Molecular Function	protease binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0010033	Biological Process	obsolete response to organic substance	Interproscan
GO:0010951	Biological Process	negative regulation of endopeptidase activity	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0051045	Biological Process	negative regulation of membrane protein ectodomain proteolysis	Interproscan
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0008083	Molecular Function	growth factor activity	Interproscan
GO:0005125	Molecular Function	cytokine activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10727	CDT1; chromatin licensing and DNA replication factor 1	-	Chromosome and associated proteins	ko03036	deepkoala