Gene detail

Detailed information of g7779.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: KAI9554151.1, hypothetical protein GHT06_019423 [Daphnia sinensis]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q75WS4	Cryptochrome DASH OS=Xenopus laevis OX=8355 GN=cry-dash PE=2 SV=1
Q4KML2	Cryptochrome DASH OS=Danio rerio OX=7955 GN=cry-dash PE=2 SV=2
Q7NMD1	Cryptochrome DASH OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=cry PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009620 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03441 all species →	FAD_binding_7	FAD binding domain of DNA photolyase	Domain	Interproscan
PF00875 all species →	DNA_photolyase	DNA photolyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006050 all species →	Domain	DNA photolyase, N-terminal	Interproscan
IPR036134 all species →	Homologous_superfamily	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	Interproscan
IPR036155 all species →	Homologous_superfamily	Cryptochrome/photolyase, N-terminal domain superfamily	Interproscan
IPR002081 all species →	Family	Cryptochrome/DNA photolyase class 1	Interproscan
IPR014133 all species →	Family	Cryptochrome DASH	Interproscan
IPR005101 all species →	Domain	Cryptochrome/DNA photolyase, FAD-binding domain	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11455 all species →	CRYPTOCHROME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000719 all species →	Biological Process	photoreactive repair	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan
GO:0003904 all species →	Molecular Function	deoxyribodipyrimidine photo-lyase activity	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan
GO:0003913 all species →	Molecular Function	DNA photolyase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g7779.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.