Detailed information of g779.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: AAG34890.1, T-box protein AmphiTbx6/16, partial [Branchiostoma floridae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O73718T-box transcription factor TBX3 (Fragment) OS=Gallus gallus OX=9031 GN=TBX3 PE=2 SV=1
Q7ZTU9T-box transcription factor TBX2b OS=Danio rerio OX=7955 GN=tbx2b PE=1 SV=4
Q9IAK8T-box transcription factor TBX5-A OS=Danio rerio OX=7955 GN=tbx5a PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyT-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF05041Pecanex_CPecanex protein (C-terminus)FamilyInterproscan
PF00907T-boxT-boxDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00654Voltage_CLCVoltage gated chloride channelFamilyInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF06396AGTRAPAngiotensin II, type I receptor-associated protein (AGTRAP)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR007735DomainPecanex, C-terminalInterproscan
IPR039797FamilyProtein PecanexInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001807FamilyChloride channel, voltage gatedInterproscan
IPR014743Homologous_superfamilyChloride channel, coreInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR052579FamilyZinc finger SWIM domain-containing proteinInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR009436FamilyType-1 angiotensin II receptor-associated proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR12372PECANEXInterproscan
PTHR11267T-BOX PROTEIN-RELATEDInterproscan
PTHR10024SYNAPTOTAGMINInterproscan
PTHR10492UNCHARACTERIZEDInterproscan
PTHR45711CHLORIDE CHANNEL PROTEINInterproscan
PTHR31569SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16521TYPE-1 ANGIOTENSIN II RECEPTOR-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0001786Molecular Functionphosphatidylserine bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0014059Biological Processregulation of dopamine secretionInterproscan
GO:0017156Biological Processcalcium-ion regulated exocytosisInterproscan
GO:0017158Biological Processregulation of calcium ion-dependent exocytosisInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005247Molecular Functionvoltage-gated chloride channel activityInterproscan
GO:0006821Biological Processchloride transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015299Molecular Functionobsolete solute:proton antiporter activityInterproscan
GO:0038166Biological Processangiotensin-activated signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24637ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)EC:2.3.2.-
Ubiquitin systemko04121deepkoala

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