Detailed information of g780.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO37187.1, predicted protein, partial [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8TEQ6Gem-associated protein 5 OS=Homo sapiens OX=9606 GN=GEMIN5 PE=1 SV=3
Q8BX17Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=2
A7RL75Tetratricopeptide repeat protein 36 homolog OS=Nematostella vectensis OX=45351 GN=ttc36 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyDUB|ULP|ULP
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF18402Thioredoxin_14Thioredoxin-like domainDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF04665Pox_A32Poxvirus A32 proteinDomainInterproscan
PF12457TIP_NTuftelin interacting protein N terminal FamilyInterproscan
PF06297PETPET DomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR038906FamilyTetratricopeptide repeat protein 36Interproscan
IPR009448FamilyUDP-glucose:Glycoprotein GlucosyltransferaseInterproscan
IPR040692DomainUGGT, thioredoxin-like domain 3Interproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR006758FamilyPoxvirus A32Interproscan
IPR022159DomainTuftelin interacting protein, N-terminal domainInterproscan
IPR045211FamilyTFP11/STIP/Ntr1Interproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR033725DomainLIM1 prickleInterproscan
IPR010442DomainPET domainInterproscan
IPR033727DomainLIM3 prickleInterproscan
IPR033723DomainPET prickleInterproscan
IPR047120FamilyPrickle/Espinas/TestinInterproscan
IPR033726DomainLIM2 prickleInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052640FamilyWD repeat domain-containing protein Gemin-5Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR052470FamilyEndoplasmic Reticulum Stress-Regulated Transcription FactorInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21405CDNA SEQUENCE BC021608Interproscan
PTHR11226UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASEInterproscan
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23329TUFTELIN-INTERACTING PROTEIN 11-RELATEDInterproscan
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR24211LIM DOMAIN-CONTAINING PROTEINInterproscan
PTHR46362GEM-ASSOCIATED PROTEIN 5Interproscan
PTHR46542X-BOX BINDING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0003980Molecular FunctionUDP-glucose:glycoprotein glucosyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0018279Biological Processprotein N-linked glycosylation via asparagineInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0071712Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0000390Biological Processspliceosomal complex disassemblyInterproscan
GO:0071008Cellular ComponentU2-type post-mRNA release spliceosomal complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032797Cellular ComponentSMN complexInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006990Biological Processobsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein responseInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20776BABAM, NBA1, MERIT40; BRISC and BRCA1-A complex member 1-Peptidases and inhibitorsko01002deepkoala
Cilium and associated proteinsko03037deepkoala
Wnt signaling pathwayko04310deepkoala
DNA repair and recombination proteinsko03400deepkoala

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