Detailed information of g7806.t1 in Acropora digitifera

Genomic Location: chr4Alt:909626...917509
NR annotation: XP_044167139.1, LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1A5H6CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1
A5YKK6CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2
Q6ZQ08CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2
 Pfam domain
No Pfam domain signature was detected for g7806.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR040398
all species →		FamilyCCR4-NOT transcription complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162
all species →		CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000288
all species →		Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0017148
all species →		Biological Processnegative regulation of translationInterproscan
GO:0030015
all species →		Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090
all species →		Molecular Functionmolecular adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g7806.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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