Detailed information of g782.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022795897.1, rab proteins geranylgeranyltransferase component A 1-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P37727Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus OX=10116 GN=Chm PE=1 SV=1
Q9QXG2Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus OX=10090 GN=Chm PE=1 SV=1
P24386Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens OX=9606 GN=CHM PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04845PurAPurA ssDNA and RNA-binding proteinFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01676MetalloenzymeMetalloenzyme superfamilyFamilyInterproscan
PF06415iPGM_NBPG-independent PGAM N-terminus (iPGM_N)DomainInterproscan
PF07724AAA_2AAA domain (Cdc48 subfamily)DomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan
PF09748Med10Transcription factor subunit Med10 of Mediator complexFamilyInterproscan
PF10193Telomere_reg-2Telomere length regulation proteinFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF028262-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domainDomainInterproscan
PF00996GDIGDP dissociation inhibitorFamilyInterproscan
PF10923BrxC_BrxDBREX system ATP-binding protein BrxC/DDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006628FamilyPurine-rich element binding protein familyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR017850Homologous_superfamilyAlkaline-phosphatase-like, core domain superfamilyInterproscan
IPR036646Homologous_superfamilyBPG-independent phosphoglycerate mutase, domain B superfamilyInterproscan
IPR006124DomainMetalloenzymeInterproscan
IPR005995FamilyPhosphoglycerate mutase, 2,3-bisphosphoglycerate-independentInterproscan
IPR011258DomainBPG-independent PGAM, N-terminalInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050130FamilyATP-dependent Clp protease/Chaperone ClpA/ClpBInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR028299Conserved_siteClpA/B, conserved site 2Interproscan
IPR001270FamilyClpA/B familyInterproscan
IPR019145FamilyMediator complex, subunit Med10Interproscan
IPR019337DomainTelomere length regulation protein, conserved domainInterproscan
IPR038528Homologous_superfamilyTEL2, C-terminal domain superfamilyInterproscan
IPR051970FamilyTelomere Length Regulation TEL2Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006140DomainD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR001738FamilyRab protein geranylgeranyltransferase component AInterproscan
IPR018203FamilyGDP dissociation inhibitorInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR021228FamilyBREX system ATP-binding protein BrxDInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12611PUR-TRANSCRIPTIONAL ACTIVATORInterproscan
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan
PTHR316372,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASEInterproscan
PTHR11638ATP-DEPENDENT CLP PROTEASEInterproscan
PTHR13345MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10Interproscan
PTHR15830TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBERInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR433332-HACID_DH_C DOMAIN-CONTAINING PROTEINInterproscan
PTHR11787RAB GDP-DISSOCIATION INHIBITORInterproscan
PTHR46585INTEGRASE CORE DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032422Molecular Functionpurine-rich negative regulatory element bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0004619Molecular Functionphosphoglycerate mutase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0006007Biological Processglucose catabolic processInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan
GO:0044262Biological Processobsolete cellular carbohydrate metabolic processInterproscan
GO:0046537Molecular Function2,3-bisphosphoglycerate-independent phosphoglycerate mutase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0034605Biological Processcellular response to heatInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0050821Biological Processprotein stabilizationInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0070209Cellular Componentobsolete ASTRA complexInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0005968Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0018344Biological Processprotein geranylgeranylationInterproscan
GO:0005092Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23460CHM, CHML; Rab proteins geranylgeranyltransferase component A-Membrane traffickingko04131deepkoala

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