Detailed information of g785.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020910042.1, RNA-binding protein 15 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96T37RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 SV=2
Q0VBL3RNA-binding protein 15 OS=Mus musculus OX=10090 GN=Rbm15 PE=1 SV=1
Q8NDT2Putative RNA-binding protein 15B OS=Homo sapiens OX=9606 GN=RBM15B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF10209DUF2340Uncharacterized conserved protein (DUF2340)FamilyInterproscan
PF07744SPOCSPOC domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00134Cyclin_NCyclin, N-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF00856SETSET domainFamilyInterproscan
PF17982C5HCHNSD Cys-His rich domainDomainInterproscan
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF07934OGG_N8-oxoguanine DNA glycosylase, N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052801FamilyAnkyrin Repeat and EF-hand Domain-containingInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR018794FamilyUncharacterised protein family UPF0538Interproscan
IPR010912DomainSpen paralogue/orthologue C-terminal, metazoaInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR006671DomainCyclin, N-terminalInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR048055DomainCyclin-Q, first cyclin boxInterproscan
IPR043198FamilyCyclin/Cyclin-like subunit Ssn8Interproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR052091FamilyBeta-alanine Activation and ResistanceInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR041306DomainNSD, Cys-His rich domainInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050777FamilySET2 Histone-Lysine N-MethyltransferaseInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR052054FamilyOxidative DNA damage repair enzymeInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR023170Homologous_superfamilyHelix-hairpin-helix, base-excision DNA repair, C-terminalInterproscan
IPR012904Domain8-oxoguanine DNA glycosylase, N-terminalInterproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24127ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR18444UPF0538 FAMILY MEMBERInterproscan
PTHR23189RNA RECOGNITION MOTIF-CONTAININGInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR10026CYCLINInterproscan
PTHR44394BETA-ALANINE-ACTIVATING ENZYMEInterproscan
PTHR22884SET DOMAIN PROTEINSInterproscan
PTHR102428-OXOGUANINE DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016538Molecular Functioncyclin-dependent protein serine/threonine kinase regulator activityInterproscan
GO:0043041Biological Processamino acid activation for nonribosomal peptide biosynthetic processInterproscan
GO:0006285Biological Processbase-excision repair, AP site formationInterproscan
GO:0034039Molecular Function8-oxo-7,8-dihydroguanine DNA N-glycosylase activityInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0008534Molecular Functionoxidized purine nucleobase lesion DNA N-glycosylase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08498STX6; syntaxin 6-Spliceosomeko03041deepkoala
Chromosome and associated proteinsko03036deepkoala
DNA repair and recombination proteinsko03400deepkoala
Membrane traffickingko04131deepkoala

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