Detailed information of g796.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047129116.1, GTPase-activating protein skywalker isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ULP9TBC1 domain family member 24 OS=Homo sapiens OX=9606 GN=TBC1D24 PE=1 SV=2
Q3UUG6TBC1 domain family member 24 OS=Mus musculus OX=10090 GN=Tbc1d24 PE=1 SV=2
A1A5K6TBC1 domain family member 24 OS=Xenopus laevis OX=8355 GN=tbc1d24 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07731Cu-oxidase_2Multicopper oxidaseDomainInterproscan
PF06537DHORDi-haem oxidoreductase, putative peroxidaseFamilyInterproscan
PF07433DUF1513Protein of unknown function (DUF1513)RepeatInterproscan
PF09375Peptidase_M75ImelysinFamilyInterproscan
PF03248Rer1Rer1 familyFamilyInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF18694TDP43_NTAR DNA-binding protein 43, N-terminal domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF06419COG6_NConserved oligomeric complex COG6, N-terminalRepeatInterproscan
PF07534TLDTLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033138Conserved_siteMulticopper oxidases, conserved siteInterproscan
IPR011706DomainMulticopper oxidase, C-terminalInterproscan
IPR036909Homologous_superfamilyCytochrome c-like domain superfamilyInterproscan
IPR051395FamilyCytochrome c-dependent Peroxidase and MauGInterproscan
IPR010538FamilyDi-haem oxidoreductase, putative peroxidaseInterproscan
IPR002355Binding_siteMulticopper oxidase, copper-binding siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR038352Homologous_superfamilyImelysin-like domain superfamilyInterproscan
IPR008972Homologous_superfamilyCupredoxinInterproscan
IPR008311FamilyUncharacterised conserved protein UCP028101Interproscan
IPR018976DomainImelysin-like domainInterproscan
IPR004932FamilyRetrieval of early ER protein Rer1Interproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR044801FamilyFilamin familyInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR041105DomainTAR DNA-binding protein 43, N-terminalInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR051070FamilyNF-kappa-B InhibitorInterproscan
IPR010490FamilyConserved oligomeric Golgi complex subunit 6Interproscan
IPR048368DomainConserved oligomeric complex COG6, N-terminalInterproscan
IPR006571DomainTLDc domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30600CYTOCHROME C PEROXIDASE-RELATEDInterproscan
PTHR10743PROTEIN RER1Interproscan
PTHR35385PROTEIN B, PUTATIVE-RELATED-RELATEDInterproscan
PTHR38537JITTERBUG, ISOFORM NInterproscan
PTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINInterproscan
PTHR46680NF-KAPPA-B INHIBITOR ALPHAInterproscan
PTHR21506COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6Interproscan
PTHR23354NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0004130Molecular Functioncytochrome-c peroxidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0006621Biological Processprotein retention in ER lumenInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007253Biological Processcytoplasmic sequestering of NF-kappaBInterproscan
GO:0051059Molecular FunctionNF-kappaB bindingInterproscan
GO:0071356Biological Processcellular response to tumor necrosis factorInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0017119Cellular ComponentGolgi transport complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006979Biological Processresponse to oxidative stressInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04437FLNA; filamin-A-Messenger RNA biogenesisko03019deepkoala
Exosomeko04147deepkoala

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