Detailed information of g8.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_093157792.1, enoyl-ACP reductase FabI [Aliiruegeria lutimaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P58380Enoyl-[acyl-carrier-protein] reductase [NADH] 1 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=fabI1 PE=3 SV=1
P58381Enoyl-[acyl-carrier-protein] reductase [NADH] 2 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=fabI2 PE=3 SV=1
Q68X10Enoyl-[acyl-carrier-protein] reductase [NADH] FabI OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=fabI PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01522Polysacc_deac_1Polysaccharide deacetylaseFamilyInterproscan
PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan
PF13458Peripla_BP_6Periplasmic binding proteinFamilyInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF07527Hairy_orangeHairy OrangeDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF02771Acyl-CoA_dh_NAcyl-CoA dehydrogenase, N-terminal domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF08736FAFERM adjacent (FA)FamilyInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF09380FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF00324AA_permeaseAmino acid permeaseDomainInterproscan
PF03522SLC12Solute carrier family 12FamilyInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR052740FamilyCarbohydrate Esterase 4Interproscan
IPR002509DomainNodB homology domainInterproscan
IPR014358FamilyEnoyl-[acyl-carrier-protein] reductase (NADH)Interproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR028081DomainLeucine-binding protein domainInterproscan
IPR000709FamilyLeu/Ile/Val-binding proteinInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR003650DomainOrange domainInterproscan
IPR050370FamilyHairy and Enhancer of Split/HEY-relatedInterproscan
IPR037069Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyInterproscan
IPR009100Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan
IPR013786DomainAcyl-CoA dehydrogenase/oxidase, N-terminalInterproscan
IPR052033FamilyMitochondrial Glutaryl-CoA DehydrogenaseInterproscan
IPR036250Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR014847DomainFERM adjacentInterproscan
IPR000299DomainFERM domainInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR051835FamilyRAC1-specific guanine nucleotide exchange factorInterproscan
IPR004841DomainAmino acid permease/ SLC12A domainInterproscan
IPR004842FamilySLC12A transporter familyInterproscan
IPR018491DomainSLC12A transporter, C-terminalInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR006309FamilyDNA polymerase 3, epsilon subunitInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006054DomainDNA polymerase III epsilon subunit, exonuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45985-Interproscan
PTHR43159ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASEInterproscan
PTHR47151LEU/ILE/VAL-BINDING ABC TRANSPORTER SUBUNITInterproscan
PTHR10985BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan
PTHR42807GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIALInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45858FERM DOMAIN CONTAINING PROTEINInterproscan
PTHR11827SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERSInterproscan
PTHR30231DNA POLYMERASE III SUBUNIT EPSILONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016810Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan
GO:0004318Molecular Functionenoyl-[acyl-carrier-protein] reductase (NADH) activityInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0006865Biological Processamino acid transportInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0050767Biological Processregulation of neurogenesisInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0000062Molecular Functionfatty-acyl-CoA bindingInterproscan
GO:0004361Molecular Functionglutaryl-CoA dehydrogenase activityInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0033539Biological Processfatty acid beta-oxidation using acyl-CoA dehydrogenaseInterproscan
GO:0046949Biological Processfatty-acyl-CoA biosynthetic processInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0006884Biological Processcell volume homeostasisInterproscan
GO:0008511Molecular Functionsodium:potassium:chloride symporter activityInterproscan
GO:0015377Molecular Functionchloride:monoatomic cation symporter activityInterproscan
GO:0015379Molecular Functionpotassium:chloride symporter activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0055064Biological Processchloride ion homeostasisInterproscan
GO:0055075Biological Processpotassium ion homeostasisInterproscan
GO:0055078Biological Processsodium ion homeostasisInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1990573Biological Processpotassium ion import across plasma membraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01999livK; branched-chain amino acid transport system substrate-binding protein-Lipid biosynthesis proteinsko01004deepkoala
Benzoate degradationko00362deepkoala
DNA repair and recombination proteinsko03400deepkoala
Transportersko02000deepkoala
G protein-coupled receptorsko04030deepkoala
DNA repair and recombination proteinsko03400deepkoala
Transportersko02000deepkoala

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