Detailed information of g808.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029180587.1, GTP-binding protein SAR1b-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3T0T7Small COPII coat GTPase SAR1B OS=Bos taurus OX=9913 GN=SAR1B PE=2 SV=1
Q9CQC9Small COPII coat GTPase SAR1B OS=Mus musculus OX=10090 GN=Sar1b PE=1 SV=1
Q5HZY2Small COPII coat GTPase SAR1B OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF06730FAM92FAM92 proteinFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF01667Ribosomal_S27eRibosomal protein S27FamilyInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan
PF04706Dickkopf_NDickkopf N-terminal cysteine-rich regionFamilyInterproscan
PF00118Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan
PF02091tRNA-synt_2eGlycyl-tRNA synthetase alpha subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR001214DomainSET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR044417DomainPRDM7/PRDM9, PR/SET domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR006687FamilySmall GTPase superfamily, SAR1-typeInterproscan
IPR009602FamilyCBY1-interacting BAR domain-containing protein/FAM92Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR052055FamilyHepadnavirus polymerase/reverse transcriptaseInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000592FamilySmall ribosomal subunit protein eS27Interproscan
IPR023407Homologous_superfamilySmall ribosomal subunit protein eS27, zinc-binding domain superfamilyInterproscan
IPR011332Homologous_superfamilyZinc-binding ribosomal proteinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR039863FamilyDickkopf related protein 1-4Interproscan
IPR006796DomainDickkopf, N-terminal cysteine-richInterproscan
IPR001844FamilyChaperonin Cpn60/GroELInterproscan
IPR002423FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR018370Conserved_siteChaperonin Cpn60, conserved siteInterproscan
IPR027409Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR027410Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan
IPR027413Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR002310FamilyGlycine-tRNA ligase, alpha subunitInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006194FamilyGlycine-tRNA synthetase, heterodimericInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45684RE74312PInterproscan
PTHR45749-Interproscan
PTHR33050REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33802SI:CH211-161H7.5-RELATEDInterproscan
PTHR1159440S RIBOSOMAL PROTEIN S27Interproscan
PTHR12113DICKKOPF3-LIKE 3Interproscan
PTHR4563360 KDA HEAT SHOCK PROTEIN, MITOCHONDRIALInterproscan
PTHR30075GLYCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003400Biological Processregulation of COPII vesicle coatingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0016050Biological Processvesicle organizationInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0061024Biological Processmembrane organizationInterproscan
GO:0070863Biological Processpositive regulation of protein exit from endoplasmic reticulumInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0039706Molecular Functionco-receptor bindingInterproscan
GO:0048019Molecular Functionreceptor antagonist activityInterproscan
GO:0090090Biological Processnegative regulation of canonical Wnt signaling pathwayInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0030178Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:0042026Biological Processprotein refoldingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0008637Biological Processapoptotic mitochondrial changesInterproscan
GO:0034514Biological Processmitochondrial unfolded protein responseInterproscan
GO:0045041Biological Processprotein import into mitochondrial intermembrane spaceInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004820Molecular Functionglycine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006426Biological Processglycyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04077groEL, HSPD1; chaperonin GroELEC:5.6.1.7
GTP-binding proteinsko04031deepkoala
Transportersko02000deepkoala
Pathways of neurodegeneration - multiple diseasesko05022deepkoala
Transfer RNA biogenesisko03016deepkoala
Ribosomeko03011deepkoala
Exosomeko04147deepkoala

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