Detailed information of g8091.t1 in Tripedalia maipoensis

Genomic Location: scaffold_4:42729616...42733572
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020479
all species →
DomainHomeobox domain, metazoaInterproscan
IPR050674
all species →
FamilyMsh Homeobox Transcriptional RegulatorsInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan
IPR000047
all species →
Conserved_siteHelix-turn-helix motifInterproscan
IPR017970
all species →
Conserved_siteHomeobox, conserved siteInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24338
all species →
HOMEOBOX PROTEIN MSXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598
all species →
Biological Processembryonic morphogenesisInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8091.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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