Detailed information of g817.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: PFX33353.1, Arylsulfatase B [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P215Pogo transposable element with KRAB domain OS=Homo sapiens OX=9606 GN=POGK PE=1 SV=2
Q80TC5Pogo transposable element with KRAB domain OS=Mus musculus OX=10090 GN=Pogk PE=2 SV=2
P51892DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF09607BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03357Snf7Snf7FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13469Sulfotransfer_3Sulfotransferase familyDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF18037Ubiquitin_5Ubiquitin-like domainDomainInterproscan
PF01762Galactosyl_TGalactosyltransferaseFamilyInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF02824TGSTGS domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR018586DomainBrinker DNA-binding domainInterproscan
IPR005024FamilySnf7 familyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050927FamilyTransient receptor potential cation channel MInterproscan
IPR005821DomainIon transport domainInterproscan
IPR039749FamilyNEDD8 ultimate buster 1Interproscan
IPR041207DomainNEDD8 ultimate buster 1, ubiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR002659FamilyGlycosyl transferase, family 31Interproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR047246DomainThreonine-tRNA ligase, class IIa, anticodon-binding domainInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004095DomainTGSInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan
PTHR10476CHARGED MULTIVESICULAR BODY PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR48312-Interproscan
PTHR13800TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan
PTHR12948NEDD8 ULTIMATE BUSTER-1 BS4 PROTEINInterproscan
PTHR11214BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR11451THREONINE-TRNA LIGASEInterproscan
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000815Cellular ComponentESCRT III complexInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0032509Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0045324Biological Processlate endosome to vacuole transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0070838Biological Processmetal ion transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:2000058Biological Processregulation of ubiquitin-dependent protein catabolic processInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:1903461Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Exosomeko04147deepkoala
Transfer RNA biogenesisko03016deepkoala

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