Detailed information of g8171.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: RMX43373.1, hypothetical protein pdam_00016088 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28397Stromelysin-1 OS=Equus caballus OX=9796 GN=MMP3 PE=2 SV=1
O23507Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1
P39900Macrophage metalloelastase OS=Homo sapiens OX=9606 GN=MMP12 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR003582DomainShKT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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