Gene detail

Detailed information of g8178.t2 in Tripedalia maipoensis

Genomic Location: scaffold_4:46428190...46442038
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08839 all species →	CDT1	DNA replication factor CDT1 like	Domain	Interproscan
PF16679 all species →	CDT1_C	DNA replication factor Cdt1 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038090 all species →	Homologous_superfamily	DNA replication factor Cdt1, C-terminal WH domain superfamily	Interproscan
IPR014939 all species →	Domain	CDT1 Geminin-binding domain-like	Interproscan
IPR032054 all species →	Domain	DNA replication factor Cdt1, C-terminal	Interproscan
IPR045173 all species →	Family	DNA replication factor Cdt1	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28637 all species →	DNA REPLICATION FACTOR CDT1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000076 all species →	Biological Process	DNA replication checkpoint signaling	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0030174 all species →	Biological Process	regulation of DNA-templated DNA replication initiation	Interproscan
GO:0070182 all species →	Molecular Function	DNA polymerase binding	Interproscan
GO:0071163 all species →	Biological Process	DNA replication preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10727	CDT1; chromatin licensing and DNA replication factor 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.