Detailed information of g818.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020627383.1, probable U3 small nucleolar RNA-associated protein 7 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9P4X3Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp7 PE=3 SV=1
O15213WD repeat-containing protein 46 OS=Homo sapiens OX=9606 GN=WDR46 PE=1 SV=3
Q9Z0H1WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08149BING4CTBING4CT (NUC141) domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF00174Oxidored_molybOxidoreductase molybdopterin binding domainDomainInterproscan
PF03404Mo-co_dimerMo-co oxidoreductase dimerisation domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF02182SAD_SRASAD/SRA domainDomainInterproscan
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF02798GST_NGlutathione S-transferase, N-terminal domainDomainInterproscan
PF00043GST_CGlutathione S-transferase, C-terminal domainDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00707IF3_CTranslation initiation factor IF-3, C-terminal domainDomainInterproscan
PF05198IF3_NTranslation initiation factor IF-3, N-terminal domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012952DomainBING4, C-terminal domainInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR040315FamilyWD repeat-containing protein WDR46/Utp7Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036374Homologous_superfamilyOxidoreductase, molybdopterin-binding domain superfamilyInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR022407Binding_siteOxidoreductase, molybdopterin binding siteInterproscan
IPR008335FamilyEukaryotic molybdopterin oxidoreductaseInterproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR000572DomainOxidoreductase, molybdopterin-binding domainInterproscan
IPR005066DomainMoybdenum cofactor oxidoreductase, dimerisationInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR003105DomainSRA-YDGInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR036987Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003582DomainShKT domainInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR040077DomainGlutathione S-transferase Theta, C-terminalInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR051369FamilyGlutathione S-transferase ThetaInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036788Homologous_superfamilyTranslation initiation factor 3 (IF-3), C-terminal domain superfamilyInterproscan
IPR019815DomainTranslation initiation factor 3, C-terminalInterproscan
IPR036787Homologous_superfamilyTranslation initiation factor 3 (IF-3), N-terminal domain superfamilyInterproscan
IPR019813Conserved_siteTranslation initiation factor 3, conserved siteInterproscan
IPR001288FamilyTranslation initiation factor 3Interproscan
IPR019814DomainTranslation initiation factor 3, N-terminalInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR050167FamilySerine/threonine-protein kinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14085WD-REPEAT PROTEIN BING4Interproscan
PTHR19372SULFITE REDUCTASEInterproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan
PTHR43917-Interproscan
PTHR22878UNCHARACTERIZEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan
PTHR10938TRANSLATION INITIATION FACTOR IF-3Interproscan
PTHR23257SERINE-THREONINE PROTEIN KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006790Biological Processsulfur compound metabolic processInterproscan
GO:0008482Molecular Functionsulfite oxidase activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0043546Molecular Functionmolybdopterin cofactor bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0030151Molecular Functionmolybdenum ion bindingInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0032790Biological Processribosome disassemblyInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0043410Biological Processpositive regulation of MAPK cascadeInterproscan
GO:1902103Biological Processnegative regulation of metaphase/anaphase transition of meiotic cell cycleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00387SUOX; sulfite oxidaseEC:1.8.3.1
Ribosome biogenesisko03009deepkoala
Chromosome and associated proteinsko03036deepkoala
Mitochondrial biogenesisko03029deepkoala
Transportersko02000deepkoala
Sulfur metabolismko00920deepkoala

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