Gene detail

Detailed information of g82.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: WP_205220246.1, VRR-NUC domain-containing protein [Desulforhopalus vacuolatus]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NW29	RWD domain-containing protein 4 OS=Homo sapiens OX=9606 GN=RWDD4 PE=1 SV=3
Q9CPR1	RWD domain-containing protein 4 OS=Mus musculus OX=10090 GN=Rwdd4 PE=2 SV=1
Q569B7	RWD domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Rwdd4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000005 (this species only)
Orthogroup (gene family)	OG0000030 (this species only)
Orthogroup (gene family)	OG0000041 (this species only)
Orthogroup (gene family)	OG0000095 (this species only)
Orthogroup (gene family)	OG0000376 (this species only)
Orthogroup (gene family)	OG0000379 (this species only)
Orthogroup (gene family)	OG0000959 (this species only)
Orthogroup (gene family)	OG0004204 (this species only)
Orthogroup (gene family)	OG0005089 (this species only)
Orthogroup (gene family)	OG0008512 (this species only)
Orthogroup (gene family)	OG0013009 (this species only)
Orthogroup (gene family)	OG0016133 (this species only)
Orthogroup (gene family)	OG0041218 (this species only)
Orthogroup (gene family)	OG0172250 (this species only)
Orthogroup (gene family)	OG0172671 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13733 all species →	Glyco_transf_7N	N-terminal region of glycosyl transferase group 7	Domain	Interproscan
PF00217 all species →	ATP-gua_Ptrans	ATP:guanido phosphotransferase, C-terminal catalytic domain	Domain	Interproscan
PF03024 all species →	Folate_rec	Folate receptor family	Domain	Interproscan
PF09588 all species →	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF00354 all species →	Pentaxin	Pentaxin family	Domain	Interproscan
PF05773 all species →	RWD	RWD domain	Domain	Interproscan
PF08774 all species →	VRR_NUC	VRR-NUC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR027995 all species →	Domain	Galactosyltransferase, N-terminal	Interproscan
IPR027749 all species →	Family	Tubulin--tyrosine ligase-like protein 12	Interproscan
IPR000749 all species →	Family	ATP:guanido phosphotransferase	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR022414 all species →	Domain	ATP:guanido phosphotransferase, catalytic domain	Interproscan
IPR022415 all species →	Active_site	ATP:guanido phosphotransferase active site	Interproscan
IPR004269 all species →	Family	Folate receptor	Interproscan
IPR018143 all species →	Domain	Folate receptor-like	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR019080 all species →	Domain	YqaJ viral recombinase	Interproscan
IPR011335 all species →	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR051360 all species →	Family	Neuronal Pentraxin and Related	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR006575 all species →	Domain	RWD domain	Interproscan
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR042770 all species →	Family	RWD domain-containing protein 4	Interproscan
IPR014883 all species →	Domain	VRR-NUC domain	Interproscan
IPR033315 all species →	Family	Fanconi-associated nuclease 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446 all species →	REVERSE TRANSCRIPTASES	Interproscan
PTHR46088 all species →	TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12	Interproscan
PTHR11547 all species →	ARGININE OR CREATINE KINASE	Interproscan
PTHR10517 all species →	FOLATE RECEPTOR	Interproscan
PTHR39953 all species →	RE54151P	Interproscan
PTHR19277 all species →	PENTRAXIN	Interproscan
PTHR21275 all species →	UNCHARACTERIZED	Interproscan
PTHR15749 all species →	FANCONI-ASSOCIATED NUCLEASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0004111 all species →	Molecular Function	creatine kinase activity	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0046314 all species →	Biological Process	phosphocreatine biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0031362 all species →	Cellular Component	obsolete anchored component of external side of plasma membrane	Interproscan
GO:0032217 all species →	Molecular Function	riboflavin transmembrane transporter activity	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan
GO:1902444 all species →	Molecular Function	riboflavin binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00933	E2.7.3.2; creatine kinase	EC:2.7.3.2	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.