Gene detail

Detailed information of g82.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_205220246.1, VRR-NUC domain-containing protein [Desulforhopalus vacuolatus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6NW29	RWD domain-containing protein 4 OS=Homo sapiens OX=9606 GN=RWDD4 PE=1 SV=3
Q9CPR1	RWD domain-containing protein 4 OS=Mus musculus OX=10090 GN=Rwdd4 PE=2 SV=1
Q569B7	RWD domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Rwdd4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13733	Glyco_transf_7N	N-terminal region of glycosyl transferase group 7	Domain	Interproscan
PF00217	ATP-gua_Ptrans	ATP:guanido phosphotransferase, C-terminal catalytic domain	Domain	Interproscan
PF03024	Folate_rec	Folate receptor family	Domain	Interproscan
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF00354	Pentaxin	Pentaxin family	Domain	Interproscan
PF05773	RWD	RWD domain	Domain	Interproscan
PF08774	VRR_NUC	VRR-NUC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR027995	Domain	Galactosyltransferase, N-terminal	Interproscan
IPR027749	Family	Tubulin--tyrosine ligase-like protein 12	Interproscan
IPR000749	Family	ATP:guanido phosphotransferase	Interproscan
IPR014746	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR022414	Domain	ATP:guanido phosphotransferase, catalytic domain	Interproscan
IPR022415	Active_site	ATP:guanido phosphotransferase active site	Interproscan
IPR004269	Family	Folate receptor	Interproscan
IPR018143	Domain	Folate receptor-like	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR051360	Family	Neuronal Pentraxin and Related	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001759	Family	Pentraxin-related	Interproscan
IPR006575	Domain	RWD domain	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR042770	Family	RWD domain-containing protein 4	Interproscan
IPR014883	Domain	VRR-NUC domain	Interproscan
IPR033315	Family	Fanconi-associated nuclease 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR46088	TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12	Interproscan
PTHR11547	ARGININE OR CREATINE KINASE	Interproscan
PTHR10517	FOLATE RECEPTOR	Interproscan
PTHR39953	RE54151P	Interproscan
PTHR19277	PENTRAXIN	Interproscan
PTHR21275	UNCHARACTERIZED	Interproscan
PTHR15749	FANCONI-ASSOCIATED NUCLEASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0004111	Molecular Function	creatine kinase activity	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0046314	Biological Process	phosphocreatine biosynthetic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016772	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0031362	Cellular Component	obsolete anchored component of external side of plasma membrane	Interproscan
GO:0032217	Molecular Function	riboflavin transmembrane transporter activity	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:1902444	Molecular Function	riboflavin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00933	E2.7.3.2; creatine kinase	EC:2.7.3.2	Exosome	ko04147	deepkoala