Detailed information of g828.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI8513853.1, MutS protein msh4 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99MT2MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1
O15457MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2
P40965MutS protein homolog 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSH4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05188MutS_IIMutS domain IIDomainInterproscan
PF09066B2-adapt-app_CBeta2-adaptin appendage, C-terminal sub-domainDomainInterproscan
PF00535Glycos_transf_2Glycosyl transferase family 2FamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004911FamilyGamma interferon inducible lysosomal thiol reductase GILTInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR015151DomainBeta-adaptin appendage, C-terminal subdomainInterproscan
IPR012295Homologous_superfamilyTBP domain superfamilyInterproscan
IPR001173DomainGlycosyltransferase 2-likeInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR039808FamilyCadherinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13234GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILTInterproscan
PTHR11675N-ACETYLGALACTOSAMINYLTRANSFERASEInterproscan
PTHR24027CADHERIN-23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016671Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan
GO:0004653Molecular Functionpolypeptide N-acetylgalactosaminyltransferase activityInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006493Biological Processprotein O-linked glycosylationInterproscan
GO:0008593Biological Processregulation of Notch signaling pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

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