Detailed information of g83.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: VDB00570.1, Superfamily I DNA and RNA helicases and helicase subunits [Olavius algarvensis spirochete endosymbiont]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZKD7Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1
Q09449Uncharacterized ATP-dependent helicase C05C10.2 OS=Caenorhabditis elegans OX=6239 GN=C05C10.2 PE=3 SV=2
Q8R151NFX1-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Znfx1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF04129Vps52_CCVps52/Sac2 family, coiled-coilRepeatInterproscan
PF20655Vps52_CVps52, C-terminalRepeatInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF13019Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF05821NDUF_B8NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR051436FamilyAutophagy-related EPG5Interproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR048319DomainVps52, coiled-coil domainInterproscan
IPR007258FamilyVps52Interproscan
IPR048361DomainVps52, C-terminalInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR050534FamilyCoronaviruses polyprotein 1abInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR024974DomainSde2, N-terminal ubiquitin domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR008699FamilyNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR31139ECTOPIC P GRANULES PROTEIN 5 HOMOLOGInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan
PTHR43788DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan
PTHR36943CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0043139Molecular Function5'-3' DNA helicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23883EPG5; ectopic P granules protein 5-Membrane traffickingko04131deepkoala
Messenger RNA biogenesisko03019deepkoala
Messenger RNA biogenesisko03019deepkoala
Membrane traffickingko04131deepkoala

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