Gene detail

Detailed information of g836.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047127019.1, eukaryotic translation initiation factor 2 subunit 1-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6GL89	Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus tropicalis OX=8364 GN=eif2s1 PE=2 SV=1
P68102	Eukaryotic translation initiation factor 2 subunit 1 OS=Bos taurus OX=9913 GN=EIF2S1 PE=2 SV=2
P05198	Eukaryotic translation initiation factor 2 subunit 1 OS=Homo sapiens OX=9606 GN=EIF2S1 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00575	S1	S1 RNA binding domain	Domain	Interproscan
PF07541	EIF_2_alpha	Eukaryotic translation initiation factor 2 alpha subunit	Family	Interproscan
PF01765	RRF	Ribosome recycling factor	Domain	Interproscan
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF04970	LRAT	Lecithin retinol acyltransferase	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF13517	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF01079	Hint	Hint module	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000014	Domain	PAS domain	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR003029	Domain	S1 domain	Interproscan
IPR011488	Family	Translation initiation factor 2, alpha subunit	Interproscan
IPR024054	Homologous_superfamily	Translation initiation factor 2, alpha subunit, middle domain superfamily	Interproscan
IPR024055	Homologous_superfamily	Translation initiation factor 2, alpha subunit, C-terminal	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR044126	Domain	IF2a, S1-like domain	Interproscan
IPR023584	Domain	Ribosome recycling factor domain	Interproscan
IPR036191	Homologous_superfamily	RRF superfamily	Interproscan
IPR002661	Family	Ribosome recycling factor	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR045088	Family	Aminotransferase ALAT1/2-like	Interproscan
IPR007053	Domain	LRAT domain	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR045241	Family	WD repeat Prp46/PLRG1-like	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR028994	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR013517	Repeat	FG-GAP repeat	Interproscan
IPR050387	Family	Hedgehog Signaling	Interproscan
IPR001767	Domain	Hedgehog protein, Hint domain	Interproscan
IPR036844	Homologous_superfamily	Hint domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10602	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1	Interproscan
PTHR20982	RIBOSOME RECYCLING FACTOR	Interproscan
PTHR10340	SPHINGOMYELIN PHOSPHODIESTERASE	Interproscan
PTHR11751	ALANINE AMINOTRANSFERASE	Interproscan
PTHR19923	WD40 REPEAT PROTEINPRL1/PRL2-RELATED	Interproscan
PTHR44103	PROPROTEIN CONVERTASE P	Interproscan
PTHR11889	HEDGEHOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005850	Cellular Component	eukaryotic translation initiation factor 2 complex	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan
GO:0033290	Cellular Component	eukaryotic 48S preinitiation complex	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0043023	Molecular Function	ribosomal large subunit binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0004021	Molecular Function	L-alanine:2-oxoglutarate aminotransferase activity	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0000974	Cellular Component	Prp19 complex	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0016540	Biological Process	protein autoprocessing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12862	PLRG1, PRL1, PRP46; pleiotropic regulator 1	-	Translation factors	ko03012	deepkoala
			Amino acid related enzymes	ko01007	deepkoala
			Enzymes with EC numbers	-	deepkoala
			Regulation of lipolysis in adipocytes	ko04923	deepkoala
			DNA repair and recombination proteins	ko03400	deepkoala