Detailed information of g841.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_046340170.1, tubulin alpha-1 chain [Haliotis rufescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P18258Tubulin alpha-1 chain OS=Paracentrotus lividus OX=7656 PE=2 SV=1
Q9BQE3Tubulin alpha-1C chain OS=Homo sapiens OX=9606 GN=TUBA1C PE=1 SV=1
P08537Tubulin alpha chain OS=Xenopus laevis OX=8355 GN=tuba PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00618RasGEF_NRasGEF N-terminal motifDomainInterproscan
PF00617RasGEFRasGEF domainFamilyInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF00026AspEukaryotic aspartyl proteaseFamilyInterproscan
PF03134TB2_DP1_HVA22TB2/DP1, HVA22 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR000651DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR036964Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR001895DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR008937FamilyRas-like guanine nucleotide exchange factorInterproscan
IPR000217FamilyTubulinInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR002452FamilyAlpha tubulinInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR014044DomainCAP domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR001461FamilyAspartic peptidase A1 familyInterproscan
IPR033121DomainPeptidase family A1 domainInterproscan
IPR004345FamilyTB2/DP1/HVA22-related proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan
PTHR23113GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan
PTHR11588TUBULINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR47966BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATEDInterproscan
PTHR12300HVA22-LIKE PROTEINSInterproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR34615PX DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01379CTSD; cathepsin DEC:3.4.23.5
Exosomeko04147deepkoala
Exosomeko04147deepkoala
Exosomeko04147deepkoala

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