Detailed information of g8446.t1 in Acropora digitifera

Genomic Location: chr4Alt:9062370...9063858
NR annotation: XP_015773579.1, PREDICTED: tripartite motif-containing protein 45-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6E2N3E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio OX=7955 GN=trim33 PE=2 SV=1
Q56R14E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Q9UPN9E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens OX=9606 GN=TRIM33 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630
all species →
FilaminFilamin/ABP280 repeatDomainInterproscan
PF00643
all species →
zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315
all species →
DomainB-box-type zinc fingerInterproscan
IPR017868
all species →
RepeatFilamin/ABP280 repeat-likeInterproscan
IPR001298
all species →
RepeatFilamin/ABP280 repeatInterproscan
IPR043136
all species →
Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR014756
all species →
Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR047153
all species →
FamilyTRIM45/56/19Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462
all species →
BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8446.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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