Gene detail

Detailed information of g845.t1 in Tripedalia maipoensis

Genomic Location: scaffold_1:42410877...42412907
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g845.t1

ATGACAATGGCTAATATTACGTACAGTCCGACAGAAACTCTTCAAAAGTTAGAGCGACTAACCCAGCTAGAAACTGTGGTAGCTGAGCAGCGTATTCGTATAGAGAAGTACCGCACCATGTACGAGACCCTAAAAGCAGAACACTCACAGTCAGATGATGTTCTAGCTCGAAAAGACACCGAACTCGCTGCGTTAAAATCCGAAATGTCTGCCACGGAGGCGCGGTTTTGTAAAGCTCTGGAACAAGTGAAGTTTGAGAGAGATGCAAAGACTCAAGAATGCGAAGAATTGCGTGTTCAAATTTTGAGTCCTCAACGATTAGAAGTTATTAAGATGAAGCTGCAAGAAGAGATTGAGGGGCCTTACCGTCAGAAGCTGGAGTCTCTTGAGTTGGAAAATGATCAATATAGAAGTACGTTTAACAAGATTCGATATGATTATTCATTTTTGAAATCAGAATTTGAACACGAGCAAGCTCAACATAAGAACGTTTTACAAGAAATACAGACTCAGCATCAGTTGGAGATTGAATCTCTTATGAAAGAAAAAGAAGCATTAATTCAACGACTGAAAACACAGGAAGCGTCGTCTGACATGCAGAAATTGCGTACTCTACAGAGAGACAACTCACAGCTCAATATGAAAATACGTAGCCTCCTTGCAGAACTGGAAGGTATACGAGAGCAAAGAGAATCCTCAGGTCTTCAGTCAGATCATGTAAGTAGACTTCAGGCTAGGCAGGTCACTGAGCTGCTAGTGCGGTGCAAGACTCTGGAGGCTGAGGCAGAAGCATGCAAAGTTCAAAACTCAAAATTGCAAAGCGAACACGAGCGACTTTTAAAAGAACAGGAGGAATTGATGGGAAAATTGTATAATGGAGAGCGGGAAAACCATTTATTGAAAAATCAGCTTAATGAGCTCGGACATACACATAAGATTAAGCTTAGCGATGTTCGTATTGAGTTAACGAAGGACAAAGGGGAATTGGAGCGTGAGCGTGACTGTCTCAGACAAGAGCTAGGAACCCTGAAAAGTAATGTCCAAATTCTCGAGCAAAACGCAGAGCATTTAAAGAAGTCAATCGAAGAAAAAGAGAAAGATGCTGTGAGACGCATACAGTTGGTGCAAGAGGCCGAGTGGGAGAAAATGTCCAATCTGGAAACGATCAAAATTCAATTAGAATCACAAGTAAGTGAATTAGAAAAGCTACAACAATCACAGGAAGCCATTCAGAAAAAACAAGTAGATCACTTGCAGGAACAAATACGGCAGCTTAAGGAGGAGAAGGGGAAACTAGACAAAGATTTTGGACTTCGGAAAGCTCAGCAGAGTCAGCAAAGCTCGTTAAAGCGGGAGTTAGAGGAAGAACAGGTACGTAGCCAAGAGATGAAACGGAAAGCTCAAACGTTACAAACTGAGATAGAGAAGCACTTGACTAATGAGCAACAGTTGAAAGACGAAGTAGAAAAACTGAAGAACACTATTTCTTTGTTAAGGAGTGAACTTTCCATGACGCAAATGCAGAGTAATGCGGATATGAATGGTTTAGCGAAAGAAATTCAAGAACAGCGTGTCAAATGGGAAGAGGAGCGTCAAGGCTTGGGCAAAAAGATTGAAGAATTGCAAAAGGAAATTAAAAGTGCCAAGAAATCAGAAGAAAAACTAAAGATGCTTGCGAAACGAAGAGATGGAAAACGAAAGCAAGAAATAAATGGCCTGACTGAGCAGATAGCACTTCTCAAGGCCAGAGAAGAGAGACTGGAGATTGAGAAGAATGCTATACAAAAGAACGTTAACTTAGAACATGAAAGGACAAGGCGTAGACTGGAAAAATTAAAAAGGGGTCACGCACAGTTTAATCGAGTTTTGAATGTAAGTGGTGCTGGTATTCCGGACTTTTCTCTCTTTGACACTACCGGTGTTCTTGGGAGTACGAGAGTTGATCGATCGCCCAAGACCGGTCCATTGCTTGATATAGACTTGGAACCTGATCTGTTCTCGGCATCCACAGGTGCTGAGGATAATTTGTAG

Transcript

g845.t1

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003631 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for g845.t1 in Tripedalia maipoensis.

InterPro

InterPro term	Type	Description	Source
IPR052116 all species →	Family	Centrosome and Cilium Assembly Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23170 all species →	NY-REN-58 ANTIGEN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0051660 all species →	Biological Process	establishment of centrosome localization	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0097539 all species →	Cellular Component	ciliary transition fiber	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16754	CEP83, CCDC41; centrosomal protein CEP83	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.