Gene detail

Detailed information of g853.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020897243.1, WD repeat-containing protein 49 isoform X1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q8IV35	Cilia- and flagella-associated protein 337 OS=Homo sapiens OX=9606 GN=CFAP337 PE=1 SV=2
Q74FW6	L-threonine ammonia-lyase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=tdcB PE=1 SV=1
Q9WYJ1	L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF00884	Sulfatase	Sulfatase	Family	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF04137	ERO1	Endoplasmic Reticulum Oxidoreductin 1 (ERO1)	Family	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF02037	SAP	SAP domain	Domain	Interproscan
PF01168	Ala_racemase_N	Alanine racemase, N-terminal domain	Domain	Interproscan
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR051065	Family	Ras-related small GTPase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR047115	Family	Arylsulfatase B	Interproscan
IPR000917	Domain	Sulfatase, N-terminal	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR051242	Family	WD repeat and EF-hand domain-containing protein	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR007266	Family	Endoplasmic reticulum oxidoreductin 1	Interproscan
IPR037192	Homologous_superfamily	ERO1-like superfamily	Interproscan
IPR039904	Family	TPR and ankyrin repeat-containing protein 1	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR003034	Domain	SAP domain	Interproscan
IPR036361	Homologous_superfamily	SAP domain superfamily	Interproscan
IPR011078	Family	Pyridoxal phosphate homeostasis protein	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR001608	Domain	Alanine racemase, N-terminal	Interproscan
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR050147	Family	Serine/Threonine Dehydratase	Interproscan
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45704	RAS-LIKE FAMILY MEMBER 11	Interproscan
PTHR10342	ARYLSULFATASE	Interproscan
PTHR44324	WD40 REPEAT DOMAIN 95	Interproscan
PTHR12613	ERO1-RELATED	Interproscan
PTHR21529	MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2	Interproscan
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan
PTHR10146	PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN	Interproscan
PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008484	Molecular Function	sulfuric ester hydrolase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0016972	Molecular Function	thiol oxidase activity	Interproscan
GO:0034975	Biological Process	protein folding in endoplasmic reticulum	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0004794	Molecular Function	threonine deaminase activity	Interproscan
GO:0006565	Biological Process	L-serine catabolic process	Interproscan
GO:0006567	Biological Process	threonine catabolic process	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12375	ARSI_J; arylsulfatase I/J	EC:3.1.6.-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala
			Valine, leucine and isoleucine biosynthesis	ko00290	deepkoala
			Membrane trafficking	ko04131	deepkoala
			Amino acid metabolism	-	deepkoala
			Enzymes with EC numbers	-	deepkoala