Detailed information of g854.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002166359.1, GTP-binding protein ypt1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33723GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ypt-1 PE=3 SV=1
P11620GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ypt1 PE=1 SV=2
Q4R8X3Ras-related protein Rab-1B OS=Macaca fascicularis OX=9541 GN=RAB1B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00067p450Cytochrome P450DomainInterproscan
PF12470SUFU_CSuppressor of Fused Gli/Ci N terminal binding domainFamilyInterproscan
PF05076SUFUSuppressor of fused protein (SUFU)FamilyInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00071RasRas familyDomainInterproscan
PF03126Plus-3Plus-3 domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR050705FamilyCytochrome P450 3AInterproscan
IPR037181Homologous_superfamilySuppressor of fused, N-terminalInterproscan
IPR016591FamilySuppressor of fused, eukaryoticInterproscan
IPR024314DomainSuppressor of fused C-terminalInterproscan
IPR038489Homologous_superfamilySuppressor of fused, C-terminal domain superfamilyInterproscan
IPR007768FamilySuppressor of fusedInterproscan
IPR020941DomainSuppressor of fused-like domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050305FamilySmall GTPase superfamily, RabInterproscan
IPR004343DomainPlus-3 domainInterproscan
IPR036128Homologous_superfamilyPlus3-like superfamilyInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24302CYTOCHROME P450 FAMILY 3Interproscan
PTHR10928SUPPRESSOR OF FUSEDInterproscan
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR47980LD44762PInterproscan
PTHR13115UNCHARACTERIZEDInterproscan
PTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0008395Molecular Functionsteroid hydroxylase activityInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0042994Biological Processcytoplasmic sequestering of transcription factorInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006904Biological Processvesicle docking involved in exocytosisInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0017157Biological Processregulation of exocytosisInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan
GO:1990269Molecular FunctionRNA polymerase II C-terminal domain phosphoserine bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15178RTF1; RNA polymerase-associated protein RTF1-Transcription machineryko03021deepkoala

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