Gene detail

Detailed information of g856.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_020616348.1, autophagy-related protein 9A-like [Orbicella faveolata]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3T904	Autophagy-related protein 9A OS=Bos taurus OX=9913 GN=ATG9A PE=2 SV=1
Q7Z3C6	Autophagy-related protein 9A OS=Homo sapiens OX=9606 GN=ATG9A PE=1 SV=3
Q68FE2	Autophagy-related protein 9A OS=Mus musculus OX=10090 GN=Atg9a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000017 (this species only)
Orthogroup (gene family)	OG0000042 (this species only)
Orthogroup (gene family)	OG0000065 (this species only)
Orthogroup (gene family)	OG0000715 (this species only)
Orthogroup (gene family)	OG0001644 (this species only)
Orthogroup (gene family)	OG0003095 (this species only)
Orthogroup (gene family)	OG0004354 (this species only)
Orthogroup (gene family)	OG0006629 (this species only)
Orthogroup (gene family)	OG0006956 (this species only)
Orthogroup (gene family)	OG0019633 (this species only)
Orthogroup (gene family)	OG0021363 (this species only)
Orthogroup (gene family)	OG0048290 (this species only)
Orthogroup (gene family)	OG0059471 (this species only)
Orthogroup (gene family)	OG0080486 (this species only)
Orthogroup (gene family)	OG0173332 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04109 all species →	ATG9	Autophagy protein ATG9	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan
PF00448 all species →	SRP54	SRP54-type protein, GTPase domain	Domain	Interproscan
PF02881 all species →	SRP54_N	SRP54-type protein, helical bundle domain	Domain	Interproscan
PF04086 all species →	SRP-alpha_N	Signal recognition particle, alpha subunit, N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007241 all species →	Family	Autophagy-related protein 9	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000897 all species →	Domain	Signal recognition particle, SRP54 subunit, GTPase domain	Interproscan
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR042101 all species →	Homologous_superfamily	Signal recognition particle SRP54, N-terminal domain superfamily	Interproscan
IPR013822 all species →	Domain	Signal recognition particle SRP54, helical bundle	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR036225 all species →	Homologous_superfamily	SRP/SRP receptor, N-terminal	Interproscan
IPR007222 all species →	Domain	Signal recognition particle receptor, alpha subunit, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13038 all species →	APG9 AUTOPHAGY 9	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR31424 all species →	PROTEIN CBG23806	Interproscan
PTHR24230 all species →	G-PROTEIN COUPLED RECEPTOR	Interproscan
PTHR43201 all species →	ACYL-COA SYNTHETASE	Interproscan
PTHR43134 all species →	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000407 all species →	Cellular Component	phagophore assembly site	Interproscan
GO:0000422 all species →	Biological Process	autophagy of mitochondrion	Interproscan
GO:0005776 all species →	Cellular Component	autophagosome	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0034497 all species →	Biological Process	protein localization to phagophore assembly site	Interproscan
GO:0044805 all species →	Biological Process	obsolete late nucleophagy	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007218 all species →	Biological Process	neuropeptide signaling pathway	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0006631 all species →	Biological Process	fatty acid metabolic process	Interproscan
GO:0031956 all species →	Molecular Function	medium-chain fatty acid-CoA ligase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0006614 all species →	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005047 all species →	Molecular Function	signal recognition particle binding	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0045047 all species →	Biological Process	protein targeting to ER	Interproscan
GO:0005785 all species →	Cellular Component	signal recognition particle receptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13431	SRPR; signal recognition particle receptor subunit alpha	-	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.