Gene detail

Detailed information of g8567.t1 in Tripedalia maipoensis

Genomic Location: scaffold_5:11512517...11536691
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03909 all species →	BSD	BSD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035925 all species →	Homologous_superfamily	BSD domain superfamily	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR005607 all species →	Domain	BSD domain	Interproscan
IPR051494 all species →	Family	BSD domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16019 all species →	SYNAPSE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g8567.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.