Detailed information of g8583.t2 in Acropora digitifera

Genomic Location: chr4Alt:10600041...10641035
NR annotation: XP_044175290.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114961454 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
O88277Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE=1 SV=1
Q9NYQ8Protocadherin Fat 2 OS=Homo sapiens OX=9606 GN=FAT2 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210
all species →
Laminin_G_2Laminin G domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF00028
all species →
CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001791
all species →
DomainLaminin G domainInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR039808
all species →
FamilyCadherinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →
CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0016342
all species →
Cellular Componentcatenin complexInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →
Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8583.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP