Detailed information of g859.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029214167.2, selenoprotein S [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0VFV6Selenoprotein S OS=Danio rerio OX=7955 GN=vimp PE=2 SV=2
Q5I030Selenoprotein S OS=Xenopus tropicalis OX=8364 GN=vimp PE=2 SV=2
P20664DNA primase small subunit OS=Mus musculus OX=10090 GN=Prim1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06936Selenoprotein_SSelenoprotein S (SelS)FamilyInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF14745WASH-4_NWASH complex subunit 4, N-terminalDomainInterproscan
PF14744WASH-7_midWASH complex subunit 7FamilyInterproscan
PF14746WASH-7_CWASH complex subunit 7, C-terminalFamilyInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF01896DNA_primase_SDNA primase small subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009703FamilySelenoprotein SInterproscan
IPR024881FamilyT-cell immunomodulatory proteinInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR051068FamilyMajor Facilitator Superfamily Domain-Containing ProteinInterproscan
IPR028191DomainWASH complex subunit 4, N-terminalInterproscan
IPR028282DomainWASH complex subunit 7, central domainInterproscan
IPR027307FamilyWASH complex subunit 7Interproscan
IPR028283DomainWASH complex subunit 7, C-terminalInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR042808FamilyC-type lectin domain family 7 member AInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR002755FamilyDNA primase, small subunitInterproscan
IPR014052FamilyDNA primase, small subunit, eukaryotic/archaealInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28621SELENOPROTEIN SInterproscan
PTHR13412T-CELL IMMUNOMODULATORY PROTEIN HOMOLOGInterproscan
PTHR23510INNER MEMBRANE TRANSPORT PROTEIN YAJRInterproscan
PTHR31409WASH COMPLEX SUBUNIT 4Interproscan
PTHR47218C-TYPE LECTIN DOMAIN FAMILY 7 MEMBER AInterproscan
PTHR10536DNA PRIMASE SMALL SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0030970Biological Processretrograde protein transport, ER to cytosolInterproscan
GO:0036502Cellular ComponentDerlin-1-VIMP complexInterproscan
GO:0036513Cellular ComponentDerlin-1 retrotranslocation complexInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0071203Cellular ComponentWASH complexInterproscan
GO:0001872Molecular Function(1->3)-beta-D-glucan bindingInterproscan
GO:0006910Biological Processphagocytosis, recognitionInterproscan
GO:0008284Biological Processpositive regulation of cell population proliferationInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016046Biological Processdetection of fungusInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0032491Biological Processdetection of molecule of fungal originInterproscan
GO:0038187Molecular Functionpattern recognition receptor activityInterproscan
GO:0050766Biological Processpositive regulation of phagocytosisInterproscan
GO:0051251Biological Processpositive regulation of lymphocyte activationInterproscan
GO:0051712Biological Processpositive regulation of killing of cells of another organismInterproscan
GO:0071226Biological Processcellular response to molecule of fungal originInterproscan
GO:0090303Biological Processpositive regulation of wound healingInterproscan
GO:1900017Biological Processpositive regulation of cytokine production involved in inflammatory responseInterproscan
GO:0003896Molecular FunctionDNA primase activityInterproscan
GO:0005658Cellular Componentalpha DNA polymerase:primase complexInterproscan
GO:0006269Biological ProcessDNA replication, synthesis of primerInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02684PRI1; DNA primase small subunitEC:2.7.7.102
Protein processing in endoplasmic reticulumko04141deepkoala
DNA replication proteinsko03032deepkoala

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