Gene detail

Detailed information of g86.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCU0924526.1, hypothetical protein [Hydrogenophaga sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9H3J6	Mitochondrial translation release factor in rescue OS=Homo sapiens OX=9606 GN=MTRFR PE=1 SV=1
Q80VP5	Mitochondrial translation release factor in rescue OS=Mus musculus OX=10090 GN=Mtrfr PE=1 SV=1
A5WUX7	Mitochondrial translation release factor in rescue OS=Danio rerio OX=7955 GN=mtrfr PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01082	Cu2_monooxygen	Copper type II ascorbate-dependent monooxygenase, N-terminal domain	Domain	Interproscan
PF00472	RF-1	RF-1 domain	Family	Interproscan
PF02535	Zip	ZIP Zinc transporter	Family	Interproscan
PF00167	FGF	Fibroblast growth factor	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF03024	Folate_rec	Folate receptor family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036939	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily	Interproscan
IPR000323	Domain	Copper type II, ascorbate-dependent monooxygenase, N-terminal	Interproscan
IPR000945	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR008977	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR045853	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan
IPR000352	Domain	Peptide chain release factor class I	Interproscan
IPR052405	Family	Mitochondrial Translation Release Factor	Interproscan
IPR003689	Family	Zinc/iron permease	Interproscan
IPR050799	Family	Zinc Iron Protein (ZIP) Transporter	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR002209	Family	Fibroblast growth factor family	Interproscan
IPR008996	Homologous_superfamily	Cytokine IL1/FGF	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050776	Family	Ankyrin Repeat and Cyclin-Dependent Kinase Inhibitor	Interproscan
IPR003388	Domain	Reticulon	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR004269	Family	Folate receptor	Interproscan
IPR018143	Domain	Folate receptor-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10157	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan
PTHR46203	PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65	Interproscan
PTHR12191	SOLUTE CARRIER FAMILY 39	Interproscan
PTHR11486	FIBROBLAST GROWTH FACTOR	Interproscan
PTHR24201	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan
PTHR10517	FOLATE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016715	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0004500	Molecular Function	dopamine beta-monooxygenase activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0006589	Biological Process	octopamine biosynthetic process	Interproscan
GO:0030667	Cellular Component	secretory granule membrane	Interproscan
GO:0042420	Biological Process	dopamine catabolic process	Interproscan
GO:0042421	Biological Process	norepinephrine biosynthetic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0006415	Biological Process	translational termination	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030001	Biological Process	metal ion transport	Interproscan
GO:0046873	Molecular Function	metal ion transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005385	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006875	Biological Process	obsolete intracellular metal ion homeostasis	Interproscan
GO:0071578	Biological Process	zinc ion import across plasma membrane	Interproscan
GO:0140410	Molecular Function	monoatomic cation:bicarbonate symporter activity	Interproscan
GO:0008083	Molecular Function	growth factor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0031362	Cellular Component	obsolete anchored component of external side of plasma membrane	Interproscan
GO:0032217	Molecular Function	riboflavin transmembrane transporter activity	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:1902444	Molecular Function	riboflavin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04358	FGF; fibroblast growth factor	-	Mitochondrial biogenesis	ko03029	deepkoala
			Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala
			Glycosaminoglycan binding proteins	ko00536	deepkoala