Detailed information of g8613.t1 in Acropora digitifera

Genomic Location: chr4Alt:11049501...11052649
NR annotation: XP_044169053.1, ATP-dependent RNA helicase DBP7-like [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6H601DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0383400 PE=2 SV=2
Q944S1DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 PE=2 SV=1
Q4PEX7ATP-dependent RNA helicase DBP8 OS=Mycosarcoma maydis OX=5270 GN=DBP8 PE=3 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270
all species →
DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR014014
all species →
DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR050079
all species →
FamilyDEAD box RNA helicaseInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545
all species →
DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959
all species →
ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003724
all species →
Molecular FunctionRNA helicase activityInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8613.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP