Gene detail

Detailed information of g8624.t1.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3172442.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation DCRIB · all data for this species · gene families

Sequence

CDS

g8624.t1

ATGGCTCGGTGTAAAAGCTTTTTCGATAATGTTAAGAATCATTTGGAGTGTTCTGTGTGTCAGGAGCAGTTTAGTGAGATCAACGAACCCAAAATACTGAAATGTCTGCACACGTTCTGTAAGACCTGTATGGAAACTTGGTTACGGCAGCAACGTGAAGGAGAGTTGAGTTGTCCGACATGTCGTCAGATCACCGAGTGTCCTAACAATATTCAAAGCCTGCCATCCAATTTGTTCTGCAAGCAGCTTGTGGAAATCGTGGAGGCTTATAGTGGGCAAGGACAAGAAGATTCACCTCGCTGTGGAATCTGCGACGAAAAGAAGTCTTTGAAATTTTATTGTTCTGATTGCAATAGCTTCTTGTGTGATGATTGCATTAGTGCCCATATGAAAGGAAAAATTTTTAAGGGTCATCATGTTAAAGAAATCGGGAACTTTGAGTCAAGCGATGTCCAAGATTATGCTCGAAGGGCAAACTTTTGCAAGAAACACAAGGATGAAATGAGGTTTTACTGCGAAAGGtgccaaatttgcatttgtCTAAACTGCGCCATATTGGAGCATCAAGACCACAAGAAAATCTCGCTTGACCAAGGACTTGAAAACAACAAGTCTGAAATTGAAATCAAAGTGCGCGAGGTTCAGGAAAACTGCTCTCGTTTGAGGAGCTACAAAGGTTCTCTGGAGAAAAGAAGACTTCAAGTAAACGGTAGTATCGAAGAAGCGACCAAAGAAGTCAAGCGCGTCGCTGAACGCTGCATTTTATTAATTCGTCAACACGAAGTAAGCGTGACTGAACGGTTAGTCCAACAGAAAGCAGGGTTCCAAGATGCCTTCGACACCCAGATGGCTAGCTTAGACGGCAAACTGATGGAAATAGAGAACACTTTGGCATTTAGTGAAGAAGTTCTTCTTCGAAAGAATTTACCGGAAATTTTAAACGTCAAAGGAACAATTGAACAGAGGCTTCAAGAACTTTCTGTGCCTTTTCAAGCTACGCCGAAGCTTGGTTACTCCGGGGTCAAGTACGTTCAAAGTGATGTTTCCTTCCTAAAAGACGCACCGGGAAAGTTGATTACAACCGATACTGAGCCTTCACTGTCAGTGGCAGAAGGCAAGAACCTCACAGAGTGTCTGGTAGGCGAGGATTGCTCTTTTACAGTAATTACTAAGAATTCGGTAGGCCAAACAACTTACAGTGAGATAGATCAAGTCAGCGTCAAAATCACATCATTGTCAAATGATAATATAAAGACCGTTGTGACGGACTTGAAGAATGGCAGTTATTCAATTTCCTACAGACCAACAACCCCTGGAGAATTCACGGTTTCTATCGAAGTTGAAGGAAACGAGATCGTGGGAAGTCCATTCAAACTGAAAGCGAGTACAAGAAGTCAATGTCctaaacaagaaaaaacaacTCCGTTGAAAAGCGCAAGGAGCAGAATTATGTGTGAAAACAGTGATGAATCAATGGAGCAAGTTCCAAAAACTACAACAGTCTCAGCACCATGTCAAGAACGTAAAGACTATGGGTCTCCGCTTCATGAGGAGGAACAGGAAGAAGTGAGAATTTCACATCCATTACATGGACGTGAAAGCAAATCGTCTCCGCGTTATGATGAGGCTGAAAACCAGGAAGATGTGAACCAAAACAGGCCAGCAACGGCAGCTGAGAATGAAGTAACTCACCCGCCTGAAAGGATCAACGATAAAACAAACACCGATCGCAAGGTCTCTTCCGCATCCTTTAAAATTCAGAGCTTTGAGATTAAGCCGAAGATTGTTAAAGTTTTTGTCGAAGCGCACGACAAAGAACTTGAAGAGATTGAAACCAAATACCACGTTGAAATACCCAGAATggcgaaagagacaaagatatGCCTGAATCCAAAAGATCAATGCAGTGCTGATGATTACGAGGAGGCTTGCAACAAATTTATCAGTCTTTACCAAAAAATGTACCAGCTGATAAAAATGCAGCGATTTTCCCTCAAAAGTGAGACAAAAATTGTTACTGCACGTGTGGCAATTAGTAATATCAGTAAAAAATTTCCAATATCGGTAGAAAGGAATAGAGATCAAAGTTGGGAGCTGTATGGAGAGGCAAGCAACATCGAGGAGGCTCTGAAATACCTCGAGGAGGAAGGAGTGGGAATAAACAAGGAAAAAGAAGACACCATGGACGAGAAAGAAAGACGCAAACAATGGAAAGACGATGAAGAGGCGATGGATGTGGATCCACATCAGCACTTCATAGGTGACAAAAAGCCAGGCAACCGGCTCGAGACCTTCTTAGCTGGAAAAGTTAAAGTGTCTGTTTATAAGGGCGACATAACCAATGAACAAGTTGATGTTATTGTGAATGCCGCTGATGAGAATCTGCAACACGATGGGGGTATGGCCAAGGCCATTCTCGACAAGGGAGGAAAGAAAATCAAGGATGAGTCACGGGCGATCATAAGAAAGCGTGGTGTACTTAAAGATGGTGAAGCAGTCTACACAAAATCTGGAAACCTGCCTTGTAAAGTGGTTGTTCATGCTGTTGGACCAAGGTGGGATGCAGTGGGATCCACGAATAGCAGAAAGATTCTTCGTCGCGCCTGTCTCAACAGTCTTATTGAAACTGAAAAACTGAGCATGACCTCTATTGCATTACCAGCTATCGGTTCCGGTATTTATGGAATGCCGAACGACGTCTGCGCTGAAGTAATGTTTGATGCTGTGGAAGAGTTTGTAAGGCAACGTGGCgcaaaaagggaaaaaatcacTGATATCCGATTCGTTGATATAGATGACCTCTCGGTACAGGCATTCACGAAAGAATTTAACAACAGATATGGTGATGACCGGGGAGGTTCCAGCAGTGGAAAGGCCTGCGGAGTAGGCACAAGCAGATCATCTCCAACAGGGGGTGAAGGTGGTGGTTTCTCGGTGCCGACCTCAAGATTAAATGCCGGCAGAGGCCAAAGCAGGAACAACCCTTACGCAGAAAACCCGAATGGCGCAGTGACTGCTTATAATGATCATCCTTTGAGTCCTTCCGGCCATCCTACATTTTCAATCTTATCTTACAGCAACGCAGTGAAAGGATACAAAGGTGGTCGCGATCCAAGGCCGCCGATAGATCAACAGCCTCGACGTCATAAAGAAAAGGGGGGATTTTCTCTTTCCCCGAAAGGAGGTGATGGAGTCACGACAGACAAAAAGGAGGAAGTGATATGGAATGATATTTACCACAAAACTAGTCCATATGGAGGTTCTCATGGGTTTGGATATCCCGACCCAGACTACCTGCGGCGAGTTAAAGAAGAGTTGGCTGCAAAAGGAATCCGCTGA

Transcript

g8624.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1
Q96XY5	Uncharacterized protein STK_23830 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_23830 PE=4 SV=1
Q8ZXT3	Uncharacterized protein PAE1111 OS=Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) OX=178306 GN=PAE1111 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001497 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21718 all species →	DTX3L_KH-like	DTX3L, KH-like domain	Domain	Interproscan
PF00630 all species →	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF01661 all species →	Macro	Macro domain	Domain	Interproscan
PF00643 all species →	zf-B_box	B-box zinc finger	Domain	Interproscan
PF18102 all species →	DTC	Deltex C-terminal domain	Domain	Interproscan
PF13639 all species →	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR048409 all species →	Domain	DTX3L, KH-like domain	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR039399 all species →	Homologous_superfamily	Deltex, C-terminal domain superfamily	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR017868 all species →	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR047153 all species →	Family	TRIM45/56/19	Interproscan
IPR000315 all species →	Domain	B-box-type zinc finger	Interproscan
IPR001298 all species →	Repeat	Filamin/ABP280 repeat	Interproscan
IPR039396 all species →	Domain	Deltex, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462 all species →	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g8624.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.