Gene detail

Detailed information of g8624.t1.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3172442.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

g8624.t1

ATGGCTCGGTGTAAAAGCTTTTTCGATAATGTTAAGAATCATTTGGAGTGTTCTGTGTGTCAGGAGCAGTTTAGTGAGATCAACGAACCCAAAATACTGAAATGTCTGCACACGTTCTGTAAGACCTGTATGGAAACTTGGTTACGGCAGCAACGTGAAGGAGAGTTGAGTTGTCCGACATGTCGTCAGATCACCGAGTGTCCTAACAATATTCAAAGCCTGCCATCCAATTTGTTCTGCAAGCAGCTTGTGGAAATCGTGGAGGCTTATAGTGGGCAAGGACAAGAAGATTCACCTCGCTGTGGAATCTGCGACGAAAAGAAGTCTTTGAAATTTTATTGTTCTGATTGCAATAGCTTCTTGTGTGATGATTGCATTAGTGCCCATATGAAAGGAAAAATTTTTAAGGGTCATCATGTTAAAGAAATCGGGAACTTTGAGTCAAGCGATGTCCAAGATTATGCTCGAAGGGCAAACTTTTGCAAGAAACACAAGGATGAAATGAGGTTTTACTGCGAAAGGtgccaaatttgcatttgtCTAAACTGCGCCATATTGGAGCATCAAGACCACAAGAAAATCTCGCTTGACCAAGGACTTGAAAACAACAAGTCTGAAATTGAAATCAAAGTGCGCGAGGTTCAGGAAAACTGCTCTCGTTTGAGGAGCTACAAAGGTTCTCTGGAGAAAAGAAGACTTCAAGTAAACGGTAGTATCGAAGAAGCGACCAAAGAAGTCAAGCGCGTCGCTGAACGCTGCATTTTATTAATTCGTCAACACGAAGTAAGCGTGACTGAACGGTTAGTCCAACAGAAAGCAGGGTTCCAAGATGCCTTCGACACCCAGATGGCTAGCTTAGACGGCAAACTGATGGAAATAGAGAACACTTTGGCATTTAGTGAAGAAGTTCTTCTTCGAAAGAATTTACCGGAAATTTTAAACGTCAAAGGAACAATTGAACAGAGGCTTCAAGAACTTTCTGTGCCTTTTCAAGCTACGCCGAAGCTTGGTTACTCCGGGGTCAAGTACGTTCAAAGTGATGTTTCCTTCCTAAAAGACGCACCGGGAAAGTTGATTACAACCGATACTGAGCCTTCACTGTCAGTGGCAGAAGGCAAGAACCTCACAGAGTGTCTGGTAGGCGAGGATTGCTCTTTTACAGTAATTACTAAGAATTCGGTAGGCCAAACAACTTACAGTGAGATAGATCAAGTCAGCGTCAAAATCACATCATTGTCAAATGATAATATAAAGACCGTTGTGACGGACTTGAAGAATGGCAGTTATTCAATTTCCTACAGACCAACAACCCCTGGAGAATTCACGGTTTCTATCGAAGTTGAAGGAAACGAGATCGTGGGAAGTCCATTCAAACTGAAAGCGAGTACAAGAAGTCAATGTCctaaacaagaaaaaacaacTCCGTTGAAAAGCGCAAGGAGCAGAATTATGTGTGAAAACAGTGATGAATCAATGGAGCAAGTTCCAAAAACTACAACAGTCTCAGCACCATGTCAAGAACGTAAAGACTATGGGTCTCCGCTTCATGAGGAGGAACAGGAAGAAGTGAGAATTTCACATCCATTACATGGACGTGAAAGCAAATCGTCTCCGCGTTATGATGAGGCTGAAAACCAGGAAGATGTGAACCAAAACAGGCCAGCAACGGCAGCTGAGAATGAAGTAACTCACCCGCCTGAAAGGATCAACGATAAAACAAACACCGATCGCAAGGTCTCTTCCGCATCCTTTAAAATTCAGAGCTTTGAGATTAAGCCGAAGATTGTTAAAGTTTTTGTCGAAGCGCACGACAAAGAACTTGAAGAGATTGAAACCAAATACCACGTTGAAATACCCAGAATggcgaaagagacaaagatatGCCTGAATCCAAAAGATCAATGCAGTGCTGATGATTACGAGGAGGCTTGCAACAAATTTATCAGTCTTTACCAAAAAATGTACCAGCTGATAAAAATGCAGCGATTTTCCCTCAAAAGTGAGACAAAAATTGTTACTGCACGTGTGGCAATTAGTAATATCAGTAAAAAATTTCCAATATCGGTAGAAAGGAATAGAGATCAAAGTTGGGAGCTGTATGGAGAGGCAAGCAACATCGAGGAGGCTCTGAAATACCTCGAGGAGGAAGGAGTGGGAATAAACAAGGAAAAAGAAGACACCATGGACGAGAAAGAAAGACGCAAACAATGGAAAGACGATGAAGAGGCGATGGATGTGGATCCACATCAGCACTTCATAGGTGACAAAAAGCCAGGCAACCGGCTCGAGACCTTCTTAGCTGGAAAAGTTAAAGTGTCTGTTTATAAGGGCGACATAACCAATGAACAAGTTGATGTTATTGTGAATGCCGCTGATGAGAATCTGCAACACGATGGGGGTATGGCCAAGGCCATTCTCGACAAGGGAGGAAAGAAAATCAAGGATGAGTCACGGGCGATCATAAGAAAGCGTGGTGTACTTAAAGATGGTGAAGCAGTCTACACAAAATCTGGAAACCTGCCTTGTAAAGTGGTTGTTCATGCTGTTGGACCAAGGTGGGATGCAGTGGGATCCACGAATAGCAGAAAGATTCTTCGTCGCGCCTGTCTCAACAGTCTTATTGAAACTGAAAAACTGAGCATGACCTCTATTGCATTACCAGCTATCGGTTCCGGTATTTATGGAATGCCGAACGACGTCTGCGCTGAAGTAATGTTTGATGCTGTGGAAGAGTTTGTAAGGCAACGTGGCgcaaaaagggaaaaaatcacTGATATCCGATTCGTTGATATAGATGACCTCTCGGTACAGGCATTCACGAAAGAATTTAACAACAGATATGGTGATGACCGGGGAGGTTCCAGCAGTGGAAAGGCCTGCGGAGTAGGCACAAGCAGATCATCTCCAACAGGGGGTGAAGGTGGTGGTTTCTCGGTGCCGACCTCAAGATTAAATGCCGGCAGAGGCCAAAGCAGGAACAACCCTTACGCAGAAAACCCGAATGGCGCAGTGACTGCTTATAATGATCATCCTTTGAGTCCTTCCGGCCATCCTACATTTTCAATCTTATCTTACAGCAACGCAGTGAAAGGATACAAAGGTGGTCGCGATCCAAGGCCGCCGATAGATCAACAGCCTCGACGTCATAAAGAAAAGGGGGGATTTTCTCTTTCCCCGAAAGGAGGTGATGGAGTCACGACAGACAAAAAGGAGGAAGTGATATGGAATGATATTTACCACAAAACTAGTCCATATGGAGGTTCTCATGGGTTTGGATATCCCGACCCAGACTACCTGCGGCGAGTTAAAGAAGAGTTGGCTGCAAAAGGAATCCGCTGA

Transcript

g8624.t1

Protein

Uniprot

Gene family

Uniprot term	Description
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1
Q96XY5	Uncharacterized protein STK_23830 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_23830 PE=4 SV=1
Q8ZXT3	Uncharacterized protein PAE1111 OS=Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) OX=178306 GN=PAE1111 PE=4 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21718	DTX3L_KH-like	DTX3L, KH-like domain	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF01661	Macro	Macro domain	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF18102	DTC	Deltex C-terminal domain	Domain	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR043472	Homologous_superfamily	Macro domain-like	Interproscan
IPR048409	Domain	DTX3L, KH-like domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR039399	Homologous_superfamily	Deltex, C-terminal domain superfamily	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR002589	Domain	Macro domain	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR039396	Domain	Deltex, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan