Gene detail

Detailed information of g8628.t1.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3138534.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

g8628.t1

ATGGCAGGCTTCTTAGACCGGATTCTGTCGCATGGGCCTAAAATAAAGGTTCTTACTCAAGAGCAAGCGGCGAGGAGCGTAGTAGTGTCGAATATAGCGCCACAGACTGCAGATGAAAACATTGTTATTCATTTTCAGAAGGAAAAGAATGGCGGAGGGGAGATCGATTATGTACACATTCCCAAGAAAGGAACAGCCGTCATTACTTTTGAAAGCAGCCTAGTCGCGAAGAGAGTCCTGAAATATTCTCACATGCTCGAAGAATCAAAATTGAAGCTTCAGCTGTTTGTTCAGAAAGAACCCCCTGAGGTTTTTAAACAAGTAAAGGCGCGTGTAAACTTTGAGACGTTCCTGCTGTCAGCTCAACAATCTCGGGACATGCTCGAAGTTCTTAAGGAAAACACGAAAGTCGCGGAAATGGACTCTAAGGATTCTAAGGACTGTAAAGTTTTCATTGTGTCTGGAACGTATAGCCAAATTGAAGCTTCACATAAACTTCTTCAGTGCCTGGTGAACCAGAAGATGAAACTGACCAGTGATACATCCACTGTCGCGAAATCTAACAGATTTGAAGTTCAACCACAGTTCATGAAACTACTGAAACGGGTGTACAAGACGAAACTTCAGGAAATAGAAGAAAATTTCTGCGTGCAGATAGATTGGGATGAAAACGCAACTCATGTGTGTATAAGTCCCAGGGAAATGTCAAACAGGCAGAACCGACGTTTCCAAGAAGGTTGTGATGCTTTCATTGACCTTTACCAGGAATTTCATCCAAACATGGGACGAGAGGAAGTTGAACTCCCAAATGGTACCGATGAAGCACGCATCATCAAGGCTGTTAACCTTGCCGAAGCCAAAGACCCCGTGATCATTGAACAGGTAGATAAGAACTTAGTAGTCTATGCGGAGAAGAATAGCATTAAAAGCTCGGTGCAGTCTTTAAAGGAAAAACTTGGCTTAAAGAACGACGGAAACAGCAGAAAGACCAAGCGGGGTCAAGGAAACAAACGTCGCGATGCTCGTGAGGAAAACGAAACATTACAACAAGGTCGCTATTcactttcaaaatgtttataTGAAGTTCTGGAAAATGGGGTTAAATTGTCTTTATACCAGGGAGATATCACCGATGAGCAGGTAGATGCCATTGTCAATGCAGCCAACGAGATGCTTCGCCACGGCGGTGGAGTGGCAGCTGCTATAGTGCGTAAAGGGGGTCGTCAGATACAAGATGAGTCCGATCAGCTAATAAAACGCTATGGACCGCTTGATGTAGGCGGAGCTGTTTATACCAGCGGAGGCTATCTCACCTGTCGCTATGTGATTCACACAGTTGGCCCGGTGTGGAAGAAACATGAGAAAGATAGAAGCAAATCCCTTCTTCACCGAGCTTGTATTGAAAGCCTCCGTCTTGCTGCAGGGAAGTTGCAGCTGTCTTCGATTGCTCTTACAGCTATCAGCTCCGGAATTTTCGGCATGCCAAAAGATATCTGTGCTCAAATCATGTTTAGCGCAGTGGAAGAATTTAGCTCAAGTAAGGAAGCTGAATTCAGTACTCTCCGTGACGTGCGTATCGTCATCATCGATGAACCAACAATGAGCGTTTTCCAAGAAGAGTTTGTTAAACGCTACCTTTCCCAAGAGGCGTCGCCAGAAACGGTGACTACCCAAGAACGTCCATCCGATGATCACATAGCAACTCTTTCGACCCCTAGCACGAACCCTGAGGTGGGTAAATCCCAGCATAATGATTCATTTGTTTCAGTGGATCACACACAGAGTGGCGAAATCAAACAACCCGATGGACAACCGGAACAGAACAGAGATGTCGATTCACCAAGTATAGCAGCTGCCCCAGACGAGGAGAACAGTGGTCAACATGCTGACCCCGAGAGTATCAAGAAAGTATCCCTCTTAAACCAAGATCCTGAGAAGTTGAAAAAAGGCTGTATGCCAAACGGCGTCAACCGACCAAAAGTAGAAGGAAATGAAGCAAGTCATGACCTAAAGCATAATGATTCAGTTCCTGTAGTAAATTCAGTTAAGGGTAACGAAAGCACTGGTTCTAAAGCGTTCTCTGGAATAGAGATAGGAAGAGGAAGAAGCAATCTTGCGCCCAAATTCCAGAAAGAAAGACTGACAACACCAAATGTAAGCACACATTTACAAGGTCCGATTGCCGATGCTGGAAGAGGAAGAGGTATCACTTCCGAAAATGCCACCACTACGAATTCGCCACCTGGTCTTGCTGTGACTGAAGAGGGCAAAAATCTTGCAAAATATATCGGAGATCATGTGACGGGTGATCCAAAGAGTAATGTTGATGGGTCTTTGAGAAACAAATATGACGTGGAGAAAAATGAATCCAGCAGTGAAGGTTTAAAAGAAGTCAACAACCATAATAATGACGAAGAAAATCGGGATGAAAATTACCTCAATGGGAGCCCAACAGAGCAGGGAAGAACAGACCAATCACATTTCAACCATCACCCCTCTGGAAACAATTTGACGCCTGATGAAAAGATGCCAGACCAAGACAAGACTACTCGGGAATCTAAGAGACCTTCAAGTGATGGGTGTAGGAAACGCCCTCCTGTTGAACATACAGAGAACGTCAAACCGATTCATGATCAACCCAAGGACGATCACACGAAAACAGGCAAGAAACTTAAACAAGAACCAGAACCAGTTGCCCACCCGACAAACGATGAAACAATGCCGTCACAAGATTCATTGACCCTTCCAACAACACAGGGAGAAGTGCACACAACGATCAAAAGTTCAGCTCAAAATGATTCTACTACAATCTGTCCACATTCTTTGTCTGATCACCTAGTTTCGCATCAGAGAGGTAATGAAGTAGATAAAGACAATACGAGAGAAAGAAGGAATGTCAAGGACCACCCAAGTCAAGACTCTGACTCAAGTCCACCACCGCTTCGTGATATGCACGTCAGACATCAGAAGAGCGAACCAAAATGTTTGATGTGTATGAATTTCAACAGAGATCTTCTTTCACCATCCAAATGTGGACGTAGTCACTACTACTGCGAGTCCTGCATAAAGCATCTTCTTCAGAAGGCGGAGTTGTGTCCACAGTGCGACAAAGAGGGTCGTTTCCAAGGAAACCAGCCCACTGGGTACATGATCTGGAATACCGCACAGAATTCACTCCCGGGATACGAGGACTGTGAAGTTATTATCATGTCTTTCACGTTTCATCCAGGAACTCAAGGTCCGGAACATCCCAATCCGGGACAGCCTTACAGTGCTTTATACACTTCAGCCTTTCTCCCTTGCAACTCAGATGGGAAAGAAGTGTGCAGTCTGCTAGAAAGGGCGTTTAATGAAAGGTTGTTGTTTACGATTGGGACGTCTCCTACTACTGGAGTGGAGAATAAGATCATTTGGAATGGCAttgaactgaaatcaaatcAAGGTGGAGGTCCAGCCAGCTATGGTTATCCAGACCCCTACTATCTTGATCGTGTGAAGAAGCAGCTGGCTAAAAAGGGAATAACACAGCTGCATGGATGA

Transcript

g8628.t1

Protein

Uniprot

Uniprot term	Description
Q8TDB6	E3 ubiquitin-protein ligase DTX3L OS=Homo sapiens OX=9606 GN=DTX3L PE=1 SV=1
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1
Q4J9D2	Uncharacterized protein Saci_1252 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=Saci_1252 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18102	DTC	Deltex C-terminal domain	Domain	Interproscan
PF01661	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002589	Domain	Macro domain	Interproscan
IPR039396	Domain	Deltex, C-terminal	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR043472	Homologous_superfamily	Macro domain-like	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR039399	Homologous_superfamily	Deltex, C-terminal domain superfamily	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan