Detailed information of g863.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_053314611.1, bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase isoform X1 [Spea bombifrons]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P02285Histone H2B, sperm OS=Marthasterias glacialis OX=7609 PE=1 SV=2
P02286Histone H2B, gonadal OS=Asterias rubens OX=7604 PE=1 SV=2
P48557Histone H2B OS=Holothuria tubulosa OX=7685 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01753zf-MYNDMYND fingerDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF00702Hydrolasehaloacid dehalogenase-like hydrolaseDomainInterproscan
PF01019G_glu_transpeptGamma-glutamyltranspeptidaseDomainInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF04613LpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FamilyInterproscan
PF00132HexapepBacterial transferase hexapeptide (six repeats)RepeatInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF07571TAF6_CTAF6 C-terminal HEAT repeat domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR003582DomainShKT domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR011949FamilyHAD-superfamily hydrolase, subfamily IA, REG-2-likeInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR051828FamilyHAD-like hydrolase domain-containing proteinInterproscan
IPR044924Homologous_superfamilyHAD-superfamily hydrolase, subfamily IA, REG-2-like, capping domain superfamilyInterproscan
IPR006439FamilyHAD hydrolase, subfamily IAInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR043137Homologous_superfamilyGamma-glutamyltranspeptidase, small subunitInterproscan
IPR000101FamilyGamma-glutamyltranspeptidaseInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR000558FamilyHistone H2BInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR007691FamilyUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxDInterproscan
IPR020573DomainUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat regionInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan
IPR001451RepeatHexapeptide repeatInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR052227FamilyArf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing proteinInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR046344Homologous_superfamilyTAF6, C-terminal HEAT repeat domain superfamilyInterproscan
IPR011442DomainTAF6, C-terminal HEAT repeat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47595HEAT SHOCK 70 KDA PROTEIN 14Interproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR46585INTEGRASE CORE DOMAIN CONTAINING PROTEINInterproscan
PTHR46191-Interproscan
PTHR11686GAMMA GLUTAMYL TRANSPEPTIDASEInterproscan
PTHR23428HISTONE H2BInterproscan
PTHR43378UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASEInterproscan
PTHR45899RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006751Biological Processglutathione catabolic processInterproscan
GO:0036374Molecular Functionglutathione hydrolase activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0009245Biological Processlipid A biosynthetic processInterproscan
GO:0016410Molecular FunctionN-acyltransferase activityInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005547Molecular Functionphosphatidylinositol-3,4,5-trisphosphate bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02536lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseEC:2.3.1.191
Exosomeko04147deepkoala
General function prediction only-deepkoala
Lipopolysaccharide biosynthesis proteinsko01005deepkoala

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