Gene detail

Detailed information of g863.t2 in Tripedalia maipoensis

Genomic Location: scaffold_1:42943942...43015746
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g863.t2

ATGGCAAAACAGATGGATAGTAGCAAATCGATATTCGGAGCGCCTTATAAGGAAACAGAGGCAAAGTTTTCTGCCAGCCTTCTTTGGCTCATCTTCCAAGCAACAAAAGATGGGCCACCATTGGAAATTCCATCAGAAATCATGAATCCAACTACCCTTAGTGAATTCGGAGACTTTGAGGTAAAAGCATCAATAGCTGAGTTCCTTACCAATGGTGATGTGTACTTTAGAGTCAGTGCAAAGATACTCAGGTTGGAAAGTGAGCCACGTTCCTTTTGGGGTGTAATTCAAGCAGTTTCTAAACATGGCTTCTATGTTGTGTGTGCTGATGGAAAAGCTGTGTCGGACACAGACTTGCAAGATTCAGAGCCATTTAATGTGAATGCTCACATCGCTTTAATGGAAAGTTTGCTTATGGCTTACTCTGCTATGCAAGTTAGTGTACAACAAATAGTATCAGCAGTACGGAGGTTTTCTTCATTCAACGCTGCCAAGGAGTTGCCATTTGATCTTGAAGATGCCCTTATTTTGTGGATGAACAAAGTGAATGGGGCCAATGACATTGCGTACTACGGAAAGAAGATGACAAGTTCTCCCTCGGAAGGAAAGCAACGGTTCCGCTTCAAGAAAGATGGCGTGCAAGAGCGAGCAGCCAAGCTCTTTCCCACTATCGAGGACCTGCACTCAGATCTGAAGGACGGCAAGACACTGCTTAGTCTTCTTCTGTTTTACTGCCCGGAAAGCATCACCGTTGACTGTATCAAGCTTTCTAAACTCCCTACCAGCGAAGAGGCCATCCATAATATTGAGCTCTTCAGAGAGCTGTGTGCTGAGCACCTTACAACTTCCGTCTTCTCACTCCGCACGGAGGACTTTTTCCACTGCAACCCCTTACTTAAAAGCAACTTTCTGGCGTTATTGTGTGACATTTTCGCAACGGTCGAGCTCGAAGCGAATTTTGCCCATAGCTTGGTATCGGATGGTGGTCATAAGCAGATGAACGATGCAACATTGAAGAATGTGGTAAAGGGTGAAAATCAAGGCCAAGTAGTCAATAAAGAAACGCAAGACCCCCGTATTAAAACCCAACACAACAGAGAGATTACGACGTCAGAGACTAGTTTTCAACCCGGTGATAGTAGGCTACCAGCAAGTGGACCCTCTGTCTTACAAAAAACTCGAGAGCAGAAGGATGGCGCTGTGGGCCCGCGTAACAGGCAGCCCTTGCTTTCTAAAAGGTCAAAGCAGCAACTTGCTCGCCTTGAAGCTGGCAAAATGATGGATGCTGAAACTGAGGTCCAAGACGTCAGAGTCGATGACTACGACTTTCAAAAGTCAACGATGATATCCTCGGGAACAGATCGTGCCAACATTCATCTTAACCCAACAGAGTCTTTCCACGCCTGGAAAACCGGCGAACAGATGTGTTCACATGACGGAAAACCAGCCAGAATATCACTCGATTTTAGGCCAGACTCGGGGCCATTAAGACAGAGGTCTTTGGAGAAGGACGGCACATCTTCAACAGCACCGAGTCAAAAAAGCATCAAGGAGAACGACCATCTCCCTTCTAAGAGTGAAAACAACATAAATGATGACATGACTGGTCCGCGACTGTCTTGGCTGAACTCTGCGAGTCTCCGTGAATTCGAACAGCTCGAACGTCTTCATGCGACTGTAGACAATACACCTGGTCCTTTAAAGAGCTTGACGTCTCATTCCAGCACGTCAAATAGCAGATCGCAGGAAATCCTTCTGAGTTGTCAATCGAACGCCATAAATGCCCCCATCTGCAATGGGTACGGCATGACGGATACGTATGAAAGCAAAAATTCCCAGGACTTCAGGGAACTTATTTCAAGAGATGACTTGAATGATTTTCGATCAGAGGTTCTAAGACGAGCACAACATTCGAAAATCATGAAACCAGTCCAAAGTTCTAACGAGCACCATGTAGACTTGGACGAGCCGCAGTTCGAGGATGATGATCCCTACGGATTTGGTGCCAGCAACATTCTGCATTTTGACAGTAAGCCAAACTGTTCCTCTCCGCAGCACCCACCTATAGTTCCCCCCGTACCACACTCGCATCCTCCTTTCTTCGATGACCACCTTGATGACGATTACCTTTCAACCATTACAGAAACCAGCGAACCTACTTCTCCCTCCGTTTATTCCTTTCAGTCTTCCGCGACGCTTAGTGATAATGCCGGAACGCCCAAAATTAACCTTTCTAGAGAAACTCTGAACCAGGACTTAGACGACGACTTGGACAACTCACCGGAGTTAATGCATCCGTCCCATATTGCTCAACAAGGATTTGTATATTCAGTTGACGTAGGAAATTTTAACGTTGCAGAACTAGGTTATCTCAATGAGGCACGAGCTCATACCCTTGGACCTGACAAGAGCTCTGTGATCCCACCGTTAAAGGGAGGTCAACCTTCCCTGCACACAGCAGAAGAATCGTGTCTGGAGCTTAGGGGTAGTTACACAGTTGTGCATGGATTCAAAAACCAGGACCATGCTCGCGCTGCCGGATTACCTGTTATTGCAGACATTGAAACCCCAAACCCGCATAACGAGGAACCTCAGCTTCCTGCTCGAGGGCGGGAGGAGCGTTCCACTCGTGCATTGCCAATTCAGGGCCACGGATCTCAGGAAGGGTCCGACTTTGAAGAGGTACCTATCATTATAAGAACCGGGTCACGTAGCTCGCGTAGCCGGAGTTCATCGTCTGGCATCTCTGTTGATGACGGCCGGATTCCGGTTGAGTCGGAAATGGAGGACCTTGACCGTCCTGGACTAGCCGTTTATAGTAGTCTTAGTGAGCAAACTGGAGGTTCACCATCAACATTCGACGCAGAGGACACAGAGGAAATGTCGAATGGGCATCTACGGCGACCATCAAGAAGTAAACGCCGTCAAAGGCCTGAAACGTGGTACGGTCCTGCTACTAACCAGCCAGATTCCGTGCCCAGGGGTCGATCTGCCTCAGATAGTGCTACGGACGAGTTTCTCGCCAAGAATGGTGAGCAAGACTTGAAACCCAATGATCACGACAACTTAGTGAACGCTAGTATGCCGCTGCCTTTTGTGCCTGATCCATTGGCAGGTATTACCTTTCAGTCTTACAAAGCTTCACCTTCCAAAATTAGTCGTCGAGCAAACAGCATTGACGAGGGCACGGTTAGCGACGACGAAAAAATTTCCATTCAATCACGCCTGCTCGATCGCAGACGATTTGGAAAAATGAACAGTGCGCACTGCTCAGGTCTTGTAGATGCCCTGCTGCCATTGAGCGGGGCAGGAGCCCTAGCAGGCGTTGAAGTGCAATGTACTGGTAATATGAGTGAGACGAAAGCCGTTACAAGTATCCTGTTAAGTCGGATGAACCACGAGGAAAGCCAAGAATTGATGGAAAAACTTACCTGGCTAGATGTATCAAAGGAGCGGAACGAAATAAGCCGATTTGAAGACAATACATACGATGGCGACAGCTCTATCCATGTGGAACGACAGGAGATTGGACCACAAACTAGCTGGGTTAAGGCTTTCAAGGATCGGTCCTTGCGGAGCCCTCAGCACATAGACAGTAGCAGCGATGATGAAGTTGACAATGGCGACGACAAGGAGGACAAGAACCTGGGCTCGCGCTTGGCCTCTTTACGTATGCAGCTGGAGGAGAGAAGGAAACACATTGAGAAAGAAAAGAAGAAAATGGTGGAGAAATGGAACGAGGAAAGAATGAAATCGGCCCATAACGCCTTTTGGCTGATGATTGGCAAAGACAAGCAAAAAGAGGTGGAACGAGAAGCGCGGTCTGAACAGAAAAGGGAACGAAAGTTTAGCAACGAAGGATCAAGTAAGGGACGAAAGGTCTGGGACCTCTATGTGCCTAAGGACGAACCACTTGAGGCGGACAACGAATGTTCTCCAAAGGAGGAGTCGGCAGCCAAGAAGAAAGGGTTAATGTTCTTTCCTCTTCATGAATCCAAATCTACGACGCCGAAATCCTTAGATTTTAAGCAGGGGCTGCATGCACTGAACTCTCCTCCTATGGAATGCTCCACTCCGCTTTCTCCCCCTGCAAACATCCAGAAAATCCAGCAATTGCCAGGGAAGCCCGCGTCCGATGCCGTGCAACGAGAAGTGAAGAGTTCTTCAACAGAAATTGTGAAGCAGAGCACGACCTCGCATTCTCGCGTTACCGCGCGATCATCGCTTGCTCACTTTGAATTGGAGACACGATCAGAGGCAGTTAGTGACTCCTTACCAGAGAGAGGACAAAGTTTGTCAGTCTTTAGAGCGTCCAATGTGCCAAAAGATAAAATGGCTGCGGAAAATGGTGACTCACCACAACCGTCTTTCCCTCAGTCGAATTCTGTTGAAGATAATGCCATTTCTGCGTATCAGAAATCAACTTCTAGTTTCGTCCGCACGTCTTCACAAGCGATGGACGCAGCCAGTCAACAACAACATGATCGGGTTCTCCTGCCTCACGATCAGGATCTTCCTATTGAAGGCTTACCTGAGCCGAAGACTAGATCGGAAGCCTACTCTGAAACGTGTCTCACAGAGAAAACCCAAGAGCAGGAACAGCTAGCTATAAATGAGACCGCTAAATTCCAAGTGATCAGCGGGGGAGATGATCATTTATCGCCAACCCTGCTGGACCGTATAAATGACCACGTGATTGCTACTCCAACGTTTGATCAAACACCACGGGTGCACGAATCAGAGACAAGTGATAGGGTCTTATCAGTTGAAACATCGCATTTGGTGACAGAGCATAGAAAGATGTCTTTGAGAGAGCAGTGTACAGTTGCAACATATGCAGAAAGAAGTGAGGTGGTGACTGTTCCGTCTTCAACTCCCGACGATCGTTCTGAGCCTGTTTTGCCGGTACCCCCTGTGCAAGTTTCGGTAAAATCATCCCCTGTAATACCTCTCGAAACCCATACAAGTGACCAAGAAACAGTGTTGAGAAGTTCCAGTGAAACTTATTTTGTCTCGGGTCCCTCTATCGCCAGTGAATCAAACAGAAAGGGCGCGGCATGGGTTGTTCCCGACGACATGCCAATGGAGGTTGATGTGGTGTCCGCTTTTGAGAGACAACCTGAAGAGCCAGAGAAGGAGAAAACGGTGAGGAGACGCAGTGGAGGAGTGGCGCTGGATATCGCTCTTAGTGACGGTCCAAGCAGCAGTAACGATGGTACTCACGTAACGCCCAATGATGGATTAGCCCTAAACGGAATGACACCCGACCAACTCAAAAAGCGAGAACGCTTCATTCAAAACAGACTCAGACAACAGCAGGAGCAAAAGGCTAAAAGAGAAGCGGATATGGAAAAAAGGCGACGGATTGAGGAGAAAAAGAAAGAGAGGAAGGAAATCTTGGAACGAAAGGAAGAAGAGGGAAGGGACAGGCTAAGAAAGAAGCGGCAGTTGGAGGAGGAACTGGCCAGGCGGAAGGCAGAAGAGGAAGAGACTGTCAGGAAGAGGGAAGAACAAATGTGGAGACTACGTCATTTTACCTCAAACAAAGAAGAGGTGGAAGTGCGCCATACTGTGGATCGGTTTCACCCCATTGGACATACATCAAGCAGCCACAGTGGGAGCACAGGACACATTCATAGCCCCGAAGAAGAGTTCGCGGCAGGCCTTGGATCAGCTACTTTCCGGGAATACAATGGACCGCCAGTTTACGTCAAACCCAGTGGGAAATCGAATCGAAAAATTATTGTCAATGCCATCTCGCATTGTTGTTTGTCCGGTGAAGTAAATAAAGATGCAAAAGAAAAGTGTCTCCAGGTTCTTTCTACGTCAGATGCAAGTCATTTCCTGGTCCTATTTCGGGACGGCCTGAAGTTCCGTGGGCTTTATTCGTACGCTCCAGAGAATGACACGGTTACTAAACTTTACGGTTTAGGACCCAGACACATAACGACAAAAATGATTGAAAAATTGTACAAATACAATAGTGGAGGAAAGGAATTCACTGAAATACACGCAAAGTCCTTCTCTATCCAAGTGGACGGACTGACTATCAAGAAAGAGTATTGGATCTCCAATAAACAAGGCGTGTCTAAAACGAACACTAATCTGAAAAAGGCCCCTGTCAAACAATCAGGTAAAAAATTGTAA

Transcript

g863.t2

Protein

g863.t2

MAKQMDSSKSIFGAPYKETEAKFSASLLWLIFQATKDGPPLEIPSEIMNPTTLSEFGDFEVKASIAEFLTNGDVYFRVSAKILRLESEPRSFWGVIQAVSKHGFYVVCADGKAVSDTDLQDSEPFNVNAHIALMESLLMAYSAMQVSVQQIVSAVRRFSSFNAAKELPFDLEDALILWMNKVNGANDIAYYGKKMTSSPSEGKQRFRFKKDGVQERAAKLFPTIEDLHSDLKDGKTLLSLLLFYCPESITVDCIKLSKLPTSEEAIHNIELFRELCAEHLTTSVFSLRTEDFFHCNPLLKSNFLALLCDIFATVELEANFAHSLVSDGGHKQMNDATLKNVVKGENQGQVVNKETQDPRIKTQHNREITTSETSFQPGDSRLPASGPSVLQKTREQKDGAVGPRNRQPLLSKRSKQQLARLEAGKMMDAETEVQDVRVDDYDFQKSTMISSGTDRANIHLNPTESFHAWKTGEQMCSHDGKPARISLDFRPDSGPLRQRSLEKDGTSSTAPSQKSIKENDHLPSKSENNINDDMTGPRLSWLNSASLREFEQLERLHATVDNTPGPLKSLTSHSSTSNSRSQEILLSCQSNAINAPICNGYGMTDTYESKNSQDFRELISRDDLNDFRSEVLRRAQHSKIMKPVQSSNEHHVDLDEPQFEDDDPYGFGASNILHFDSKPNCSSPQHPPIVPPVPHSHPPFFDDHLDDDYLSTITETSEPTSPSVYSFQSSATLSDNAGTPKINLSRETLNQDLDDDLDNSPELMHPSHIAQQGFVYSVDVGNFNVAELGYLNEARAHTLGPDKSSVIPPLKGGQPSLHTAEESCLELRGSYTVVHGFKNQDHARAAGLPVIADIETPNPHNEEPQLPARGREERSTRALPIQGHGSQEGSDFEEVPIIIRTGSRSSRSRSSSSGISVDDGRIPVESEMEDLDRPGLAVYSSLSEQTGGSPSTFDAEDTEEMSNGHLRRPSRSKRRQRPETWYGPATNQPDSVPRGRSASDSATDEFLAKNGEQDLKPNDHDNLVNASMPLPFVPDPLAGITFQSYKASPSKISRRANSIDEGTVSDDEKISIQSRLLDRRRFGKMNSAHCSGLVDALLPLSGAGALAGVEVQCTGNMSETKAVTSILLSRMNHEESQELMEKLTWLDVSKERNEISRFEDNTYDGDSSIHVERQEIGPQTSWVKAFKDRSLRSPQHIDSSSDDEVDNGDDKEDKNLGSRLASLRMQLEERRKHIEKEKKKMVEKWNEERMKSAHNAFWLMIGKDKQKEVEREARSEQKRERKFSNEGSSKGRKVWDLYVPKDEPLEADNECSPKEESAAKKKGLMFFPLHESKSTTPKSLDFKQGLHALNSPPMECSTPLSPPANIQKIQQLPGKPASDAVQREVKSSSTEIVKQSTTSHSRVTARSSLAHFELETRSEAVSDSLPERGQSLSVFRASNVPKDKMAAENGDSPQPSFPQSNSVEDNAISAYQKSTSSFVRTSSQAMDAASQQQHDRVLLPHDQDLPIEGLPEPKTRSEAYSETCLTEKTQEQEQLAINETAKFQVISGGDDHLSPTLLDRINDHVIATPTFDQTPRVHESETSDRVLSVETSHLVTEHRKMSLREQCTVATYAERSEVVTVPSSTPDDRSEPVLPVPPVQVSVKSSPVIPLETHTSDQETVLRSSSETYFVSGPSIASESNRKGAAWVVPDDMPMEVDVVSAFERQPEEPEKEKTVRRRSGGVALDIALSDGPSSSNDGTHVTPNDGLALNGMTPDQLKKRERFIQNRLRQQQEQKAKREADMEKRRRIEEKKKERKEILERKEEEGRDRLRKKRQLEEELARRKAEEEETVRKREEQMWRLRHFTSNKEEVEVRHTVDRFHPIGHTSSSHSGSTGHIHSPEEEFAAGLGSATFREYNGPPVYVKPSGKSNRKIIVNAISHCCLSGEVNKDAKEKCLQVLSTSDASHFLVLFRDGLKFRGLYSYAPENDTVTKLYGLGPRHITTKMIEKLYKYNSGGKEFTEIHAKSFSIQVDGLTIKKEYWISNKQGVSKTNTNLKKAPVKQSGKKL*

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11971 all species →	CAMSAP_CH	CAMSAP CH domain	Domain	Interproscan
PF08683 all species →	CAMSAP_CKK	Microtubule-binding calmodulin-regulated spectrin-associated	Domain	Interproscan
PF17095 all species →	CAMSAP_CC1	Spectrin-binding region of Ca2+-Calmodulin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022613 all species →	Domain	Calmodulin-regulated spectrin-associated protein-like, Calponin-homology domain	Interproscan
IPR011033 all species →	Homologous_superfamily	PRC-barrel-like superfamily	Interproscan
IPR032940 all species →	Family	Calmodulin-regulated spectrin-associated protein	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR014797 all species →	Domain	CKK domain	Interproscan
IPR038209 all species →	Homologous_superfamily	CKK domain superfamily	Interproscan
IPR031372 all species →	Conserved_site	CAMSAP, spectrin and Ca2+/calmodulin-binding region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21595 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007026 all species →	Biological Process	negative regulation of microtubule depolymerization	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0036449 all species →	Cellular Component	microtubule minus-end	Interproscan
GO:0051011 all species →	Molecular Function	microtubule minus-end binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030507 all species →	Molecular Function	spectrin binding	Interproscan
GO:0031175 all species →	Biological Process	neuron projection development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17493	CAMSAP; calmodulin-regulated spectrin-associated protein	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.