Detailed information of g8631.t1 in Acropora digitifera

Genomic Location: chr4Alt:11296892...11301133
NR annotation: XP_015751713.1, PREDICTED: ribonuclease P protein subunit p40-like isoform X1 [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R1F9Ribonuclease P protein subunit p40 OS=Mus musculus OX=10090 GN=Rpp40 PE=2 SV=2
Q5BK64Ribonuclease P protein subunit p40 OS=Rattus norvegicus OX=10116 GN=Rpp40 PE=2 SV=2
A7YWU3Ribonuclease P protein subunit p40 OS=Bos taurus OX=9913 GN=RPP40 PE=2 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08584
all species →		Ribonuc_P_40Ribonuclease P 40kDa (Rpp40) subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013893
all species →		FamilyRibonuclease P protein subunit Rpp40Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15396
all species →		RIBONUCLEASE P PROTEIN SUBUNIT P40Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001682
all species →		Biological ProcesstRNA 5'-leader removalInterproscan
GO:0030677
all species →		Cellular Componentribonuclease P complexInterproscan
GO:0000171
all species →		Molecular Functionribonuclease MRP activityInterproscan
GO:0000172
all species →		Cellular Componentribonuclease MRP complexInterproscan
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0004526
all species →		Molecular Functionribonuclease P activityInterproscan
GO:0030681
all species →		Cellular Componentmultimeric ribonuclease P complexInterproscan
GO:1905267
all species →		Biological Processobsolete endonucleolytic cleavage involved in tRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g8631.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP