Gene detail

Detailed information of g8657.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_028402356.1, 60S ribosomal protein L4-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P02385	Large ribosomal subunit protein uL4B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=1 SV=2
P08429	Large ribosomal subunit protein uL4A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2
G1SVW5	Large ribosomal subunit protein uL4 OS=Oryctolagus cuniculus OX=9986 GN=RPL4 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|DCUN1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03556	Cullin_binding	Cullin binding	Family	Interproscan
PF14555	UBA_4	UBA-like domain	Domain	Interproscan
PF00573	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan
PF14374	Ribos_L4_asso_C	60S ribosomal protein L4 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013000	Conserved_site	Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved site	Interproscan
IPR005176	Domain	Potentiating neddylation domain	Interproscan
IPR023574	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan
IPR045240	Family	Large ribosomal subunit protein uL4, eukaryotic and archaeal type	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR042460	Homologous_superfamily	DCN1-like, PONY binding domain	Interproscan
IPR002136	Family	Large ribosomal subunit protein uL4	Interproscan
IPR025755	Domain	Large ribosomal subunit protein uL4, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19431	60S RIBOSOMAL PROTEIN L4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan