Detailed information of g868.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_020394157.1, histidine--tRNA ligase [Thiolinea disciformis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8YMC2Histidine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=hisS PE=1 SV=1
Q3MAV8Histidine--tRNA ligase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=hisS PE=3 SV=1
B2J5J5Histidine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=hisS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01843DILDIL domainRepeatInterproscan
PF00788RARas association (RalGDS/AF-6) domainDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF05649Peptidase_M13_NPeptidase family M13FamilyInterproscan
PF01431Peptidase_M13Peptidase family M13FamilyInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021832FamilyAnkyrin repeat domain-containing protein 13Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR028842FamilyAfadinInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR002710DomainDilute domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR000159DomainRas-associating domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR037977DomainAfadin, cargo binding domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR042089Homologous_superfamilyPeptidase M13, domain 2Interproscan
IPR008753DomainPeptidase M13, N-terminal domainInterproscan
IPR018497DomainPeptidase M13, C-terminal domainInterproscan
IPR000718FamilyPeptidase M13Interproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR015807FamilyHistidine-tRNA ligaseInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR004516FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12447ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10398AFADINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR11733ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATEDInterproscan
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006621Biological Processprotein retention in ER lumenInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05702AF6, MLLT4; afadin-Transfer RNA biogenesisko03016deepkoala
Leukocyte transendothelial migrationko04670deepkoala

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