Detailed information of g871.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBL0691412.1, PBP1A family penicillin-binding protein [SAR324 cluster bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1RKC5Penicillin-binding protein 1A OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=mrcA PE=3 SV=1
Q68VU2Penicillin-binding protein 1A OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=mrcA PE=3 SV=1
Q9KNU5Penicillin-binding protein 1A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=mrcA PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10274ParcGParkin co-regulated proteinRepeatInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF20784DUF5575_CDUF5575 C-terminal domainDomainInterproscan
PF02127Peptidase_M18Aminopeptidase I zinc metalloprotease (M18)FamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF00912TransglyTransglycosylaseFamilyInterproscan
PF04079SMC_ScpBSegregation and condensation complex subunit ScpBFamilyInterproscan
PF01472PUAPUA domainFamilyInterproscan
PF03938OmpHOuter membrane protein (OmpH-like)DomainInterproscan
PF17092PCB_OBPenicillin-binding protein OB-like domainFamilyInterproscan
PF00905TranspeptidasePenicillin binding protein transpeptidase domainDomainInterproscan
PF00696AA_kinaseAmino acid kinase familyFamilyInterproscan
PF13409GST_N_2Glutathione S-transferase, N-terminal domainDomainInterproscan
PF09730BicDMicrotubule-associated protein Bicaudal-DCoiled-coilInterproscan
PF05454DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan
PF14538Raptor_NRaptor N-terminal CASPase like domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019399FamilyParkin co-regulated proteinInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR049218DomainDUF5575, C-terminal domainInterproscan
IPR052579FamilyZinc finger SWIM domain-containing proteinInterproscan
IPR001948FamilyPeptidase M18Interproscan
IPR023358Homologous_superfamilyPeptidase M18, domain 2Interproscan
IPR002478DomainPUA domainInterproscan
IPR005715FamilyGlutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthaseInterproscan
IPR005632FamilyChaperone protein SkpInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR001264DomainGlycosyl transferase, family 51Interproscan
IPR024930Homologous_superfamilySkp domain superfamilyInterproscan
IPR012338Homologous_superfamilyBeta-lactamase/transpeptidase-likeInterproscan
IPR001057FamilyGlutamate/acetylglutamate kinaseInterproscan
IPR036393Homologous_superfamilyAcetylglutamate kinase-like superfamilyInterproscan
IPR050396FamilyGlycosyltransferase 51/TranspeptidaseInterproscan
IPR005234FamilyChromosome segregation/condensation protein ScpBInterproscan
IPR023346Homologous_superfamilyLysozyme-like domain superfamilyInterproscan
IPR036950Homologous_superfamilyPenicillin binding protein transglycosylase domainInterproscan
IPR041739DomainGlutamate-5-kinase domainInterproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan
IPR031376DomainPenicillin-binding protein, OB-like domainInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001460DomainPenicillin-binding protein, transpeptidaseInterproscan
IPR001048DomainAspartate/glutamate/uridylate kinaseInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR016639FamilyGlutathione S-transferase Omega/GSHInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR018477FamilyBicaudal-D proteinInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR027468Homologous_superfamilyAlpha-dystroglycan domain 2Interproscan
IPR008465DomainDystroglycan, C-terminalInterproscan
IPR029347DomainRaptor, N-terminal CASPase-like domainInterproscan
IPR004083FamilyRegulatory associated protein of TORInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013395FamilyCRISPR-associated Cas3, Yersinia-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21207PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATEDInterproscan
PTHR31569SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR28570ASPARTYL AMINOPEPTIDASEInterproscan
PTHR32282BINDING PROTEIN TRANSPEPTIDASE, PUTATIVE-RELATEDInterproscan
PTHR32419GLUTATHIONYL-HYDROQUINONE REDUCTASEInterproscan
PTHR31233BICAUDAL D FAMILY MEMBERInterproscan
PTHR21559DYSTROGLYCAN-RELATEDInterproscan
PTHR12848REGULATORY-ASSOCIATED PROTEIN OF MTORInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030544Molecular FunctionHsp70 protein bindingInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0060548Biological Processobsolete negative regulation of cell deathInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004177Molecular Functionaminopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006561Biological Processproline biosynthetic processInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0008658Molecular Functionpenicillin bindingInterproscan
GO:0008955Molecular Functionpeptidoglycan glycosyltransferase activityInterproscan
GO:0009252Biological Processpeptidoglycan biosynthetic processInterproscan
GO:0046677Biological Processresponse to antibioticInterproscan
GO:0051304Biological Processchromosome separationInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0008093Molecular Functioncytoskeletal anchor activityInterproscan
GO:0070840Molecular Functiondynein complex bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0009267Biological Processcellular response to starvationInterproscan
GO:0010506Biological Processregulation of autophagyInterproscan
GO:0030307Biological Processpositive regulation of cell growthInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031929Biological ProcessTOR signalingInterproscan
GO:0031931Cellular ComponentTORC1 complexInterproscan
GO:0038202Biological ProcessTORC1 signalingInterproscan
GO:0071230Biological Processcellular response to amino acid stimulusInterproscan
GO:0071902Biological Processpositive regulation of protein serine/threonine kinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26163PACRG; parkin coregulated gene protein-Membrane traffickingko04131deepkoala
Ubiquitin systemko04121deepkoala

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