Detailed information of g8750.t2 in Tripedalia maipoensis

Genomic Location: scaffold_5:21560109...21840593
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17902
all species →		SH3_10SH3 domainDomainInterproscan
PF02187
all species →		GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan
IPR003108
all species →		DomainGAR domainInterproscan
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR036534
all species →		Homologous_superfamilyGAR domain superfamilyInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR041615
all species →		DomainDesmoplakin, SH3 domainInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915
all species →		SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008017
all species →		Molecular Functionmicrotubule bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003786
all species →		Molecular Functionactin lateral bindingInterproscan
GO:0005826
all species →		Cellular Componentactomyosin contractile ringInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0030054
all species →		Cellular Componentcell junctionInterproscan
GO:0030864
all species →		Cellular Componentcortical actin cytoskeletonInterproscan
GO:0032432
all species →		Cellular Componentactin filament bundleInterproscan
GO:0042995
all species →		Cellular Componentcell projectionInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:1903478
all species →		Biological Processobsolete actin filament bundle convergence involved in mitotic contractile ring assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10382DST; dystonin-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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