Detailed information of g878.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT3226804.1, rod shape-determining protein [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0A9X5Cell shape-determining protein MreB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mreB PE=3 SV=1
P0A9X4Cell shape-determining protein MreB OS=Escherichia coli (strain K12) OX=83333 GN=mreB PE=1 SV=1
P0A9X7Cell shape-determining protein MreB OS=Salmonella typhi OX=90370 GN=mreB PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06723MreB_MblMreB/Mbl proteinFamilyInterproscan
PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan
PF02894GFO_IDH_MocA_COxidoreductase family, C-terminal alpha/beta domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF09668Asp_proteaseAspartyl proteaseFamilyInterproscan
PF11953DUF3470Domain of unknown function (DUF3470)FamilyInterproscan
PF00037Fer44Fe-4S binding domainDomainInterproscan
PF00749tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF01808AICARFT_IMPCHasAICARFT/IMPCHase bienzymeFamilyInterproscan
PF02142MGSMGS-like domainDomainInterproscan
PF07940Hepar_II_IIIHeparinase II/III-like proteinFamilyInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF08565CDC37_MCdc37 Hsp90 binding domainDomainInterproscan
PF08564CDC37_CCdc37 C terminal domainDomainInterproscan
PF03234CDC37_NCdc37 N terminal kinase bindingDomainInterproscan
PF14926CFAP300Cilia- and flagella-associated protein 300FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR004753FamilyCell shape determining protein MreBInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR051450FamilyGfo/Idh/MocA OxidoreductasesInterproscan
IPR000683DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan
IPR004104DomainGfo/Idh/MocA-like oxidoreductase, C-terminalInterproscan
IPR033882DomainDNA damage inducible protein 1 ubiquitin-like domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR019103DomainAspartic peptidase, DDI1-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR011607DomainMethylglyoxal synthase-like domainInterproscan
IPR002695FamilyBifunctional purine biosynthesis protein PurH-likeInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR016193Homologous_superfamilyCytidine deaminase-likeInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR024051Homologous_superfamilyAICAR transformylase, duplicated domain superfamilyInterproscan
IPR022569DomainFerredoxin, C-terminalInterproscan
IPR020058DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR012480FamilyHeparinase II/III-likeInterproscan
IPR000813Family7Fe ferredoxinInterproscan
IPR036914Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR051025FamilyRho GTPase-activatingInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013873DomainCdc37, C-terminalInterproscan
IPR013874DomainCdc37, Hsp90 bindingInterproscan
IPR013855DomainCdc37, N-terminal domainInterproscan
IPR038189Homologous_superfamilyCdc37, Hsp90-binding domain superfamilyInterproscan
IPR004918FamilyCdc37Interproscan
IPR029416FamilyCilia- and flagella-associated protein 300Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR051023FamilyProtein Phosphatase 2A Regulatory Subunit AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42749CELL SHAPE-DETERMINING PROTEIN MREBInterproscan
PTHR43377BILIVERDIN REDUCTASE AInterproscan
PTHR15397SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATEDInterproscan
PTHR11692BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURHInterproscan
PTHR16146INTELECTINInterproscan
PTHR15228SPERMATHECAL PHYSIOLOGY VARIANTInterproscan
PTHR12800CDC37-RELATEDInterproscan
PTHR31078CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 300Interproscan
PTHR10648SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003937Molecular FunctionIMP cyclohydrolase activityInterproscan
GO:0004643Molecular Functionphosphoribosylaminoimidazolecarboxamide formyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0006189Biological Process'de novo' IMP biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0031072Molecular Functionheat shock protein bindingInterproscan
GO:0050821Biological Processprotein stabilizationInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0019888Molecular Functionprotein phosphatase regulator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24230CFAP300; cilia- and flagella-associated protein 300-Prokaryotic defense systemko02048deepkoala
Proteasomeko03051deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala
Cilium and associated proteinsko03037deepkoala

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