Gene detail

Detailed information of g88.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: WP_058500095.1, DUF4011 domain-containing protein [Legionella gratiana]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P75033	Uncharacterized ATP-dependent helicase MG140 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_153 PE=3 SV=1
P47386	Uncharacterized ATP-dependent helicase MG140 OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=MG140 PE=3 SV=1
B8V7S0	CUB and peptidase domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000097 (this species only)
Orthogroup (gene family)	OG0001273 (this species only)
Orthogroup (gene family)	OG0001610 (this species only)
Orthogroup (gene family)	OG0001692 (this species only)
Orthogroup (gene family)	OG0013096 (this species only)
Orthogroup (gene family)	OG0024478 (this species only)
Orthogroup (gene family)	OG0059446 (this species only)
Orthogroup (gene family)	OG0170999 (this species only)
Orthogroup (gene family)	OG0171055 (this species only)
Orthogroup (gene family)	OG0171208 (this species only)
Orthogroup (gene family)	OG0171549 (this species only)
Orthogroup (gene family)	OG0173204 (this species only)
Orthogroup (gene family)	OG0173654 (this species only)
Orthogroup (gene family)	OG0174451 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05221 all species →	AdoHcyase	S-adenosyl-L-homocysteine hydrolase	Domain	Interproscan
PF00670 all species →	AdoHcyase_NAD	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	Domain	Interproscan
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF01186 all species →	Lysyl_oxidase	Lysyl oxidase	Family	Interproscan
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF13195 all species →	DUF4011	Protein of unknown function (DUF4011)	Family	Interproscan
PF00089 all species →	Trypsin	Trypsin	Domain	Interproscan
PF14763 all species →	HPS3_C	Hermansky-Pudlak syndrome 3 protein, C-terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020082 all species →	Conserved_site	S-adenosyl-L-homocysteine hydrolase, conserved site	Interproscan
IPR042172 all species →	Homologous_superfamily	Adenosylhomocysteinase-like superfamily	Interproscan
IPR000043 all species →	Family	Adenosylhomocysteinase-like	Interproscan
IPR015878 all species →	Domain	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124 all species →	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR001695 all species →	Family	Lysyl oxidase	Interproscan
IPR050912 all species →	Family	Lysyl oxidase-like protein	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR025103 all species →	Family	Uncharacterized ATP-dependent helicase MG140	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR001254 all species →	Domain	Serine proteases, trypsin domain	Interproscan
IPR050127 all species →	Family	Serine Proteases (Peptidase S1 Family)	Interproscan
IPR001314 all species →	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR029438 all species →	Domain	BLOC-2 complex member HPS3, C-terminal domain	Interproscan
IPR018114 all species →	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23420 all species →	ADENOSYLHOMOCYSTEINASE	Interproscan
PTHR23227 all species →	BUCENTAUR RELATED	Interproscan
PTHR23507 all species →	ZGC:174356	Interproscan
PTHR45817 all species →	LYSYL OXIDASE-LIKE-RELATED	Interproscan
PTHR24264 all species →	TRYPSIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0033353 all species →	Biological Process	S-adenosylmethionine cycle	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0016641 all species →	Molecular Function	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	Interproscan
GO:0004720 all species →	Molecular Function	protein-lysine 6-oxidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0018057 all species →	Biological Process	peptidyl-lysine oxidation	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g88.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.