Detailed information of g880.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBL0691233.1, PAS domain S-box protein [SAR324 cluster bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P55175Deaminated glutathione amidase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=sll0601 PE=3 SV=1
P0DP66Deaminated glutathione amidase OS=Synechocystis sp. (strain PCC 6803 / GT-S) OX=1111707 GN=nit1 PE=1 SV=1
Q06067Signal transduction histidine-protein kinase AtoS OS=Escherichia coli (strain K12) OX=83333 GN=atoS PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF13426PAS_9PAS domainDomainInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF00795CN_hydrolaseCarbon-nitrogen hydrolaseFamilyInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF00512HisKAHis Kinase A (phospho-acceptor) domainDomainInterproscan
PF13174TPR_6Tetratricopeptide repeatRepeatInterproscan
PF00431CUBCUB domainDomainInterproscan
PF04099SybindinSybindin-like family FamilyInterproscan
PF06741LsmADLsmAD domainDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF13854Kelch_5Kelch motifRepeatInterproscan
PF13415Kelch_3Galactose oxidase, central domainRepeatInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF02910Succ_DH_flav_CFumarate reductase flavoprotein C-termDomainInterproscan
PF00890FAD_binding_2FAD binding domainFamilyInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF03351DOMONDOMON domainDomainInterproscan
PF20700MutatorMutator-like transposaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036097Homologous_superfamilySignal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR036526Homologous_superfamilyCarbon-nitrogen hydrolase superfamilyInterproscan
IPR003661DomainSignal transduction histidine kinase, dimerisation/phosphoacceptor domainInterproscan
IPR045254DomainNit1/2, carbon-nitrogen hydrolase domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR003010DomainCarbon-nitrogen hydrolaseInterproscan
IPR004358DomainSignal transduction histidine kinase-related protein, C-terminalInterproscan
IPR005467DomainHistidine kinase domainInterproscan
IPR001110Conserved_siteUncharacterised protein family UPF0012, conserved siteInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000859DomainCUB domainInterproscan
IPR023347Homologous_superfamilyLysozyme domain superfamilyInterproscan
IPR050841FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR007233FamilyTrafficking protein particle complex subunitInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR009604DomainLsmAD domainInterproscan
IPR045117FamilyAtaxin2-likeInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR043536FamilyHost cell factorInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR051561FamilyFRAS1-related extracellular matrixInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR027477Homologous_superfamilySuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilyInterproscan
IPR015939DomainFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR003953DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan
IPR030664FamilyFAD-dependent oxidoreductase SdhA/FrdA/AprAInterproscan
IPR037099Homologous_superfamilyFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamilyInterproscan
IPR014006FamilySuccinate dehydrogenase/fumarate reductase, flavoprotein subunitInterproscan
IPR011281FamilySuccinate dehydrogenase, flavoprotein subunitInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR005018DomainDOMON domainInterproscan
IPR045266DomainCopper-dependent monooxygenases, DOMON domainInterproscan
IPR000945FamilyDopamine beta-hydroxylase-likeInterproscan
IPR049012DomainMutator-like transposase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23088NITRILASE-RELATEDInterproscan
PTHR24251OVOCHYMASE-RELATEDInterproscan
PTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITInterproscan
PTHR12854ATAXIN 2-RELATEDInterproscan
PTHR46003HOST CELL FACTORInterproscan
PTHR45739MATRIX PROTEIN, PUTATIVE-RELATEDInterproscan
PTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITInterproscan
PTHR12606SENTRIN/SUMO-SPECIFIC PROTEASEInterproscan
PTHR10157DOPAMINE BETA HYDROXYLASE RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016811Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidesInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0016310Biological ProcessphosphorylationInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0003796Molecular Functionlysozyme activityInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030008Cellular ComponentTRAPP complexInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0034063Biological Processstress granule assemblyInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0035097Cellular Componenthistone methyltransferase complexInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000104Molecular Functionsuccinate dehydrogenase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0009061Biological Processanaerobic respirationInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0022900Biological Processelectron transport chainInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016926Biological Processprotein desumoylationInterproscan
GO:0016929Molecular FunctiondeSUMOylase activityInterproscan
GO:0004500Molecular Functiondopamine beta-monooxygenase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20300TRAPPC1, BET5; trafficking protein particle complex subunit 1-ECM-receptor interactionko04512deepkoala
Membrane traffickingko04131deepkoala

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