Genomic Location: chr4Alt:13295991...13303059
NR annotation: XP_029188115.2, splicing factor U2af large subunit A-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g8804.t2 |
| Transcript |
| chr4Alt.g8804.t2 |
| Protein |
| chr4Alt.g8804.t2 |
| UniProt accession | Description |
|---|---|
| A0A0D1C8Z4 | Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX=5270 GN=GRP1 PE=1 SV=1 |
| Q9ZR39 | Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia OX=4092 GN=U2AF65A PE=2 SV=1 |
| Q8L716 | Splicing factor U2af large subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF65B PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02213 all species → | GYF | GYF domain | Domain | Interproscan |
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR003169 all species → | Domain | GYF domain | Interproscan |
| IPR035445 all species → | Homologous_superfamily | GYF-like domain superfamily | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR050441 all species → | Family | RNA-binding motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48034 all species → | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
g8804.t2.
