Detailed information of g882.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_072681082.1, 4-hydroxythreonine-4-phosphate dehydrogenase [Arcobacter sp. LA11]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0RNS34-hydroxythreonine-4-phosphate dehydrogenase OS=Campylobacter fetus subsp. fetus (strain 82-40) OX=360106 GN=pdxA PE=3 SV=1
Q30S584-hydroxythreonine-4-phosphate dehydrogenase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) OX=326298 GN=pdxA PE=3 SV=1
B6JP924-hydroxythreonine-4-phosphate dehydrogenase OS=Helicobacter pylori (strain P12) OX=570508 GN=pdxA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF13344Hydrolase_6Haloacid dehalogenase-like hydrolaseDomainInterproscan
PF00750tRNA-synt_1dtRNA synthetases class I (R)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan
PF01052FliMN_CType III flagellar switch regulator (C-ring) FliN C-termFamilyInterproscan
PF15100TMEM187TMEM187 protein familyFamilyInterproscan
PF07986TBCCTubulin binding cofactor CDomainInterproscan
PF01529DHHCDHHC palmitoyltransferaseFamilyInterproscan
PF04166PdxAPyridoxal phosphate biosynthetic protein PdxAFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR045195DomainLOG2-like, modified RING finger, C3HC5-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR045194FamilyE3 ubiquitin-protein ligase MGRN1/RNF157-likeInterproscan
IPR006357FamilyHAD-superfamily hydrolase, subfamily IIAInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR050324FamilyCDP-alcohol phosphatidyltransferase class-IInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR006353FamilyHAD-superfamily hydrolase, subfamily IIA, CECR5Interproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR001278FamilyArginine-tRNA ligaseInterproscan
IPR035684DomainArginyl-tRNA synthetase, catalytic core domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR010139FamilyImidazole glycerol phosphate synthase, subunit HInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan
IPR001543DomainFlagellar motor switch protein FliN-like, C-terminal domainInterproscan
IPR001172FamilyFlagellar motor switch FliN/Type III secretion HrcQbInterproscan
IPR036429Homologous_superfamilySpoA-like superfamilyInterproscan
IPR051469FamilyFlagellar motor switch protein FliN/MopA/SpaOInterproscan
IPR012826FamilyFlagellar motor switch FliNInterproscan
IPR028066FamilyTransmembrane protein 187Interproscan
IPR017901DomainC-CAP/cofactor C-like domainInterproscan
IPR006599DomainCARP motifInterproscan
IPR016098Homologous_superfamilyCyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalInterproscan
IPR012945DomainTubulin binding cofactor C-like domainInterproscan
IPR039589FamilyTBCC domain-containing protein 1Interproscan
IPR036223Homologous_superfamilyAdenylate cyclase-associated CAP, C-terminal superfamilyInterproscan
IPR001594DomainPalmitoyltransferase, DHHC domainInterproscan
IPR037539Family4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteriaInterproscan
IPR005255FamilyPdxA familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45460SIMILAR TO CYSTEINE PROTEINASEInterproscan
PTHR22996MAHOGUNINInterproscan
PTHR14269CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATEDInterproscan
PTHR11956ARGINYL-TRNA SYNTHETASEInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR42701IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISHInterproscan
PTHR43484-Interproscan
PTHR15066TRANSMEMBRANE PROTEIN 187Interproscan
PTHR16052UNCHARACTERIZEDInterproscan
PTHR12246PALMITOYLTRANSFERASE ZDHHC16Interproscan
PTHR300044-HYDROXYTHREONINE-4-PHOSPHATE DEHYDROGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0046474Biological Processglycerophospholipid biosynthetic processInterproscan
GO:0004814Molecular Functionarginine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006420Biological Processarginyl-tRNA aminoacylationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000105Biological ProcessL-histidine biosynthetic processInterproscan
GO:0016763Molecular Functionpentosyltransferase activityInterproscan
GO:0000107Molecular Functionimidazoleglycerol-phosphate synthase activityInterproscan
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0006935Biological ProcesschemotaxisInterproscan
GO:0009425Cellular Componentbacterial-type flagellum basal bodyInterproscan
GO:0071973Biological Processbacterial-type flagellum-dependent cell motilityInterproscan
GO:0009288Cellular Componentbacterial-type flagellumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030133Cellular Componenttransport vesicleInterproscan
GO:0031616Cellular Componentspindle pole centrosomeInterproscan
GO:0051661Biological Processmaintenance of centrosome locationInterproscan
GO:0051684Biological Processmaintenance of Golgi locationInterproscan
GO:0016409Molecular Functionpalmitoyltransferase activityInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02417fliN; flagellar motor switch protein FliN-Vitamin B6 metabolismko00750deepkoala
Histidine metabolismko00340deepkoala
Membrane traffickingko04131deepkoala
Bacterial motility proteinsko02035deepkoala

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