Detailed information of g883.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_169625867.1, PfkB family carbohydrate kinase [Pacificispira spongiicola]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5KYR35-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=iolC PE=3 SV=1
A4IPB35-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=iolC PE=3 SV=1
B6IVG3Polyribonucleotide nucleotidyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00294PfkBpfkB family carbohydrate kinaseDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF08755YccV-likeHemimethylated DNA-binding protein YccV likeDomainInterproscan
PF08216CTNNBLCatenin-beta-like, Arm-motif containing nuclearRepeatInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan
PF11708Slu7Pre-mRNA splicing Prp18-interacting factorDomainInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029056Homologous_superfamilyRibokinase-likeInterproscan
IPR011611DomainCarbohydrate kinase PfkBInterproscan
IPR002139FamilyRibokinase/fructokinaseInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001478DomainPDZ domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050614FamilySynaptic Scaffolding LAP/MAGUK FamiliesInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR053189FamilyChloroplast Clp protease adapter protein ClpFInterproscan
IPR011722DomainHemimethylated DNA-binding domainInterproscan
IPR036623Homologous_superfamilyHemimethylated DNA-binding domain superfamilyInterproscan
IPR039678FamilyBeta-catenin-like protein 1Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR013180DomainBeta-catenin-like protein 1, N-terminalInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR003029DomainS1 domainInterproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004087DomainK Homology domainInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR029000Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR044666FamilyCyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-likeInterproscan
IPR002130DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR039974FamilyPre-mRNA-splicing factor SLU7Interproscan
IPR021715DomainPre-mRNA-splicing factor SLU7 domainInterproscan
IPR050955FamilyPlant Biomass Hydrolyzing EsteraseInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR000306DomainFYVE zinc fingerInterproscan
IPR036598Homologous_superfamilyGOLD domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR009038DomainGOLD domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR010061FamilyMethylmalonate-semialdehyde dehydrogenaseInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR050653FamilyProtease Inhibitors and Growth Factor AntagonistsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10584SUGAR KINASEInterproscan
PTHR23119DISCS LARGEInterproscan
PTHR48351YCCV-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14978BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEINInterproscan
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan
PTHR45625PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATEDInterproscan
PTHR12942STEP II SPLICING FACTOR SLU7Interproscan
PTHR43037UNNAMED PRODUCT-RELATEDInterproscan
PTHR46753FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR43866MALONATE-SEMIALDEHYDE DEHYDROGENASEInterproscan
PTHR10913FOLLISTATIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016301Molecular Functionkinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0009790Biological Processembryo developmentInterproscan
GO:0016323Cellular Componentbasolateral plasma membraneInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0097120Biological Processreceptor localization to synapseInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0000413Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0008380Biological ProcessRNA splicingInterproscan
GO:0030628Molecular Functionpre-mRNA 3'-splice site bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0072383Biological Processplus-end-directed vesicle transport along microtubuleInterproscan
GO:1901098Biological Processpositive regulation of autophagosome maturationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004491Molecular Functionmethylmalonate-semialdehyde dehydrogenase (acylating, NAD) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006574Biological Processvaline catabolic processInterproscan
GO:0018478Molecular Functionmalonate-semialdehyde dehydrogenase (acetylating) activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12734PPIL3; peptidyl-prolyl cis-trans isomerase-like 3EC:5.2.1.8
Transfer RNA biogenesisko03016deepkoala
NOD-like receptor signaling pathwayko04621deepkoala
Chaperones and folding catalystsko03110deepkoala

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